利用深度学习方法对白细胞进行分类和分割的综合数据分析。

IF 2.5 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS
Şeyma Nur Özcan, Tansel Uyar, Gökay Karayeğen
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引用次数: 0

摘要

深度学习方法经常被用于人类外周血细胞的分类和分割。以往研究的共同特点是使用一个以上的数据集,但都是分开使用。目前还没有发现将两个以上的数据集结合在一起使用的研究。在分类方面,通过混合使用四个不同的数据集,识别出了五种类型的白细胞。在分割方面,确定了四种类型的白细胞,并应用了三种不同的神经网络,包括 CNN(卷积神经网络)、UNet 和 SegNet。本研究的分类结果与相关研究的结果进行了比较。平衡准确率为 98.03%,独立于训练的数据集的测试准确率为 97.27%。在细胞核和细胞质检测方面,所提出的 CNN 在依赖训练的数据集和不依赖训练的数据集上的分割准确率分别为 98.9% 和 92.82%。在本研究中,所提出的方法表明它能从与训练无关的数据集中高精度地检测出白细胞。此外,该方法在分类和分割方面都取得了成功,有望成为一种可用于临床的诊断工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Comprehensive data analysis of white blood cells with classification and segmentation by using deep learning approaches

Comprehensive data analysis of white blood cells with classification and segmentation by using deep learning approaches

Deep learning approaches have frequently been used in the classification and segmentation of human peripheral blood cells. The common feature of previous studies was that they used more than one dataset, but used them separately. No study has been found that combines more than two datasets to use together. In classification, five types of white blood cells were identified by using a mixture of four different datasets. In segmentation, four types of white blood cells were determined, and three different neural networks, including CNN (Convolutional Neural Network), UNet and SegNet, were applied. The classification results of the presented study were compared with those of related studies. The balanced accuracy was 98.03%, and the test accuracy of the train-independent dataset was determined to be 97.27%. For segmentation, accuracy rates of 98.9% for train-dependent dataset and 92.82% for train-independent dataset for the proposed CNN were obtained in both nucleus and cytoplasm detection. In the presented study, the proposed method showed that it could detect white blood cells from a train-independent dataset with high accuracy. Additionally, it is promising as a diagnostic tool that can be used in the clinical field, with successful results in classification and segmentation.

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来源期刊
Cytometry Part A
Cytometry Part A 生物-生化研究方法
CiteScore
8.10
自引率
13.50%
发文量
183
审稿时长
4-8 weeks
期刊介绍: Cytometry Part A, the journal of quantitative single-cell analysis, features original research reports and reviews of innovative scientific studies employing quantitative single-cell measurement, separation, manipulation, and modeling techniques, as well as original articles on mechanisms of molecular and cellular functions obtained by cytometry techniques. The journal welcomes submissions from multiple research fields that fully embrace the study of the cytome: Biomedical Instrumentation Engineering Biophotonics Bioinformatics Cell Biology Computational Biology Data Science Immunology Parasitology Microbiology Neuroscience Cancer Stem Cells Tissue Regeneration.
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