跨降水梯度的外生菌根真菌群落功能分化的潜力。

IF 5.1 Q1 ECOLOGY
ISME communications Pub Date : 2024-03-04 eCollection Date: 2024-01-01 DOI:10.1093/ismeco/ycae031
Peter T Pellitier, Michael Van Nuland, Asaf Salamov, Igor V Grigoriev, Kabir G Peay
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引用次数: 0

摘要

功能特征会影响微生物群落的组合,但在环境中识别这些特征仍然具有挑战性。我们研究了分布在美国西北太平洋地区降水梯度上的杨树根部的外生菌根真菌(EMF)群落。我们采用分类(元条形码)和功能(元基因组)方法对这些群落进行了分析。我们假设,参与真菌干旱胁迫耐受性和真菌介导的植物水分吸收的基因在较干旱的土壤中最为丰富。我们未能检测到这一假设的支持;相反,涉及黑色素合成、亲水蛋白、水汽蛋白、三卤糖合成酶和其他基因家族的基因丰度在梯度上没有明显变化。最后,我们研究了某些基因序列同源性的变化,发现干燥土壤中的真菌群落由不同的水汽素和疏水素基因序列组成。总之,我们的研究结果表明,虽然EMF群落在这一梯度上表现出显著的组成变化,但至少从群落元基因组学的角度推断,其耦合功能更替是有限的。因此,这些不同的电磁场群落对植物水分吸收的影响仍然是未知的,今后需要针对干旱胁迫耐受基因的表达进行研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Potential for functional divergence in ectomycorrhizal fungal communities across a precipitation gradient.

Functional traits influence the assembly of microbial communities, but identifying these traits in the environment has remained challenging. We studied ectomycorrhizal fungal (EMF) communities inhabiting Populus trichocarpa roots distributed across a precipitation gradient in the Pacific Northwest, USA. We profiled these communities using taxonomic (meta-barcoding) and functional (metagenomic) approaches. We hypothesized that genes involved in fungal drought-stress tolerance and fungal mediated plant water uptake would be most abundant in drier soils. We were unable to detect support for this hypothesis; instead, the abundance of genes involved in melanin synthesis, hydrophobins, aquaporins, trehalose-synthases, and other gene families exhibited no significant shifts across the gradient. Finally, we studied variation in sequence homology for certain genes, finding that fungal communities in dry soils are composed of distinct aquaporin and hydrophobin gene sequences. Altogether, our results suggest that while EMF communities exhibit significant compositional shifts across this gradient, coupled functional turnover, at least as inferred using community metagenomics is limited. Accordingly, the consequences of these distinct EMF communities on plant water uptake remain critically unknown, and future studies targeting the expression of genes involved in drought stress tolerance are required.

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