{"title":"4-硝基苯甲酸吖啶鎓盐和 4-硝基苯甲酸 2-氨基-3-甲基吡啶鎓盐的晶体结构、分子间相互作用、电荷密度分布和 ADME 特性:实验和理论的综合研究","authors":"Hemalatha Balasubramanian, Petchi Raman Mariappan, Kumaradhas Poomani","doi":"10.1107/s2053229624002250","DOIUrl":null,"url":null,"abstract":"Acridines are a class of bioactive agents which exhibit high biological stability and the ability to intercalate with DNA; they have a wide range of applications. Pyridine derivatives have a wide range of biological activities. To enhance the properties of acridine and 2-amino-3-methylpyridine as the active pharmaceutical ingredient (API), 4-nitrobenzoic acid was chosen as a coformer. In the present study, a mixture of acridine and 4-nitrobenzoic acid forms the salt acridinium 4-nitrobenzoate, C<sub>13</sub>H<sub>10</sub>N<sup>+</sup>·C<sub>7</sub>H<sub>4</sub>NO<sub>4</sub><sup>−</sup> (<b>I</b>), whereas a mixture of 2-amino-3-methylpyridine and 4-nitrobenzoic acid forms the salt 2-amino-3-methylpyridinium 4-nitrobenzoate, C<sub>6</sub>H<sub>9</sub>N<sub>2</sub><sup>+</sup>·C<sub>7</sub>H<sub>4</sub>NO<sub>4</sub><sup>−</sup> (<b>II</b>). In both salts, protonation takes place at the ring N atom. The crystal structure of both salts is predominantly governed by hydrogen-bond interactions. In salt <b>I</b>, C—H…O and N—H…O interactions form an infinite chain in the crystal, whereas in salt <b>II</b>, intermolecular N—H…O interactions form an eight-membered <i>R</i><sub>2</sub><sup>2</sup>(8) ring motif. A theoretical charge–density analysis reveals the charge–density distribution of the inter- and intramolecular interactions of both salts. An <i>in-silico</i> ADME analysis predicts the druglikeness properties of both salts and the results confirm that both salts are potential drug candidates with good bioavailability scores and there is no violation of the Lipinski rules, which supports the druglikeness properties of both salts. However, although both salts exhibit drug-like properties, salt <b>I</b> has higher gastrointestinal absorption than salt <b>II</b> and hence it may be considered a potential drug candidate.","PeriodicalId":510890,"journal":{"name":"Acta Crystallographica Section C","volume":"28 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Crystal structure, intermolecular interactions, charge–density distribution and ADME properties of the acridinium 4-nitrobenzoate and 2-amino-3-methylpyridinium 4-nitrobenzoate salts: a combined experimental and theoretical study\",\"authors\":\"Hemalatha Balasubramanian, Petchi Raman Mariappan, Kumaradhas Poomani\",\"doi\":\"10.1107/s2053229624002250\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Acridines are a class of bioactive agents which exhibit high biological stability and the ability to intercalate with DNA; they have a wide range of applications. Pyridine derivatives have a wide range of biological activities. To enhance the properties of acridine and 2-amino-3-methylpyridine as the active pharmaceutical ingredient (API), 4-nitrobenzoic acid was chosen as a coformer. In the present study, a mixture of acridine and 4-nitrobenzoic acid forms the salt acridinium 4-nitrobenzoate, C<sub>13</sub>H<sub>10</sub>N<sup>+</sup>·C<sub>7</sub>H<sub>4</sub>NO<sub>4</sub><sup>−</sup> (<b>I</b>), whereas a mixture of 2-amino-3-methylpyridine and 4-nitrobenzoic acid forms the salt 2-amino-3-methylpyridinium 4-nitrobenzoate, C<sub>6</sub>H<sub>9</sub>N<sub>2</sub><sup>+</sup>·C<sub>7</sub>H<sub>4</sub>NO<sub>4</sub><sup>−</sup> (<b>II</b>). In both salts, protonation takes place at the ring N atom. The crystal structure of both salts is predominantly governed by hydrogen-bond interactions. In salt <b>I</b>, C—H…O and N—H…O interactions form an infinite chain in the crystal, whereas in salt <b>II</b>, intermolecular N—H…O interactions form an eight-membered <i>R</i><sub>2</sub><sup>2</sup>(8) ring motif. A theoretical charge–density analysis reveals the charge–density distribution of the inter- and intramolecular interactions of both salts. An <i>in-silico</i> ADME analysis predicts the druglikeness properties of both salts and the results confirm that both salts are potential drug candidates with good bioavailability scores and there is no violation of the Lipinski rules, which supports the druglikeness properties of both salts. However, although both salts exhibit drug-like properties, salt <b>I</b> has higher gastrointestinal absorption than salt <b>II</b> and hence it may be considered a potential drug candidate.\",\"PeriodicalId\":510890,\"journal\":{\"name\":\"Acta Crystallographica Section C\",\"volume\":\"28 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-03-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Crystallographica Section C\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1107/s2053229624002250\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Crystallographica Section C","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1107/s2053229624002250","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
吖啶是一类生物活性剂,具有很高的生物稳定性和与 DNA 交互作用的能力,应用范围十分广泛。吡啶衍生物具有广泛的生物活性。为了增强吖啶和 2-氨基-3-甲基吡啶作为活性药物成分(API)的特性,我们选择了 4-硝基苯甲酸作为共聚物。在本研究中,吖啶和 4-硝基苯甲酸的混合物形成 4-硝基苯甲酸吖啶鎓盐,C13H10N+-C7H4NO4-(I),而 2-氨基-3-甲基吡啶和 4-硝基苯甲酸的混合物形成 4-硝基苯甲酸 2-氨基-3-甲基吡啶鎓盐,C6H9N2+-C7H4NO4-(II)。在这两种盐中,质子化都发生在环 N 原子上。这两种盐的晶体结构主要受氢键相互作用的支配。在盐 I 中,C-H...O 和 N-H...O 相互作用在晶体中形成一条无限链,而在盐 II 中,分子间 N-H...O 相互作用形成一个八元 R22(8) 环图案。理论电荷密度分析揭示了这两种盐的分子间和分子内相互作用的电荷密度分布。结果证实,这两种盐都是潜在的候选药物,具有良好的生物利用度,而且没有违反 Lipinski 规则,这支持了这两种盐的药物亲和性。不过,虽然两种盐都具有类药物特性,但盐 I 的胃肠道吸收率高于盐 II,因此可被视为潜在的候选药物。
Crystal structure, intermolecular interactions, charge–density distribution and ADME properties of the acridinium 4-nitrobenzoate and 2-amino-3-methylpyridinium 4-nitrobenzoate salts: a combined experimental and theoretical study
Acridines are a class of bioactive agents which exhibit high biological stability and the ability to intercalate with DNA; they have a wide range of applications. Pyridine derivatives have a wide range of biological activities. To enhance the properties of acridine and 2-amino-3-methylpyridine as the active pharmaceutical ingredient (API), 4-nitrobenzoic acid was chosen as a coformer. In the present study, a mixture of acridine and 4-nitrobenzoic acid forms the salt acridinium 4-nitrobenzoate, C13H10N+·C7H4NO4− (I), whereas a mixture of 2-amino-3-methylpyridine and 4-nitrobenzoic acid forms the salt 2-amino-3-methylpyridinium 4-nitrobenzoate, C6H9N2+·C7H4NO4− (II). In both salts, protonation takes place at the ring N atom. The crystal structure of both salts is predominantly governed by hydrogen-bond interactions. In salt I, C—H…O and N—H…O interactions form an infinite chain in the crystal, whereas in salt II, intermolecular N—H…O interactions form an eight-membered R22(8) ring motif. A theoretical charge–density analysis reveals the charge–density distribution of the inter- and intramolecular interactions of both salts. An in-silico ADME analysis predicts the druglikeness properties of both salts and the results confirm that both salts are potential drug candidates with good bioavailability scores and there is no violation of the Lipinski rules, which supports the druglikeness properties of both salts. However, although both salts exhibit drug-like properties, salt I has higher gastrointestinal absorption than salt II and hence it may be considered a potential drug candidate.