Sungchul Kim, Yong-geun Choi, Kirsten Janssen, Christian Bull, Bhagyashree S. Joshi, Adam Pomorski, Vered Raz, Marvin E. Tanenbaum, Pascal Miesen, Zeshi Li, Chirlmin Joo
{"title":"在 RNA 纯化过程中,N-糖基化分子可作为辅助沉淀剂","authors":"Sungchul Kim, Yong-geun Choi, Kirsten Janssen, Christian Bull, Bhagyashree S. Joshi, Adam Pomorski, Vered Raz, Marvin E. Tanenbaum, Pascal Miesen, Zeshi Li, Chirlmin Joo","doi":"10.1101/2024.03.12.584655","DOIUrl":null,"url":null,"abstract":"A recent ground-breaking study suggested that small RNA from mammalian cells can undergo N-glycan modifications (termed glycoRNA). The discovery relied upon a metabolic glycan labeling strategy in combination with commonly used phase-separation-based RNA isolation. Following the reported procedure, we likewise identified an N-glycosylated species in the RNA fraction. However, our results suggest that the reported RNase sensitivity of the glycosylated species depends on the specific RNA purification method. This suggests the possibility of co-purifying unexpected RNase-insensitive N-glycoconjugates during glycoRNA isolation, hinting at the complex biochemical nature of glycoRNA. Our study underscores the need for further research to elucidate the structural and biochemical properties of glycoRNA.","PeriodicalId":501108,"journal":{"name":"bioRxiv - Molecular Biology","volume":"19 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"N-glycosylated molecules act as a co-precipitant in RNA purification\",\"authors\":\"Sungchul Kim, Yong-geun Choi, Kirsten Janssen, Christian Bull, Bhagyashree S. Joshi, Adam Pomorski, Vered Raz, Marvin E. Tanenbaum, Pascal Miesen, Zeshi Li, Chirlmin Joo\",\"doi\":\"10.1101/2024.03.12.584655\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"A recent ground-breaking study suggested that small RNA from mammalian cells can undergo N-glycan modifications (termed glycoRNA). The discovery relied upon a metabolic glycan labeling strategy in combination with commonly used phase-separation-based RNA isolation. Following the reported procedure, we likewise identified an N-glycosylated species in the RNA fraction. However, our results suggest that the reported RNase sensitivity of the glycosylated species depends on the specific RNA purification method. This suggests the possibility of co-purifying unexpected RNase-insensitive N-glycoconjugates during glycoRNA isolation, hinting at the complex biochemical nature of glycoRNA. Our study underscores the need for further research to elucidate the structural and biochemical properties of glycoRNA.\",\"PeriodicalId\":501108,\"journal\":{\"name\":\"bioRxiv - Molecular Biology\",\"volume\":\"19 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-03-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"bioRxiv - Molecular Biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1101/2024.03.12.584655\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"bioRxiv - Molecular Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1101/2024.03.12.584655","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
N-glycosylated molecules act as a co-precipitant in RNA purification
A recent ground-breaking study suggested that small RNA from mammalian cells can undergo N-glycan modifications (termed glycoRNA). The discovery relied upon a metabolic glycan labeling strategy in combination with commonly used phase-separation-based RNA isolation. Following the reported procedure, we likewise identified an N-glycosylated species in the RNA fraction. However, our results suggest that the reported RNase sensitivity of the glycosylated species depends on the specific RNA purification method. This suggests the possibility of co-purifying unexpected RNase-insensitive N-glycoconjugates during glycoRNA isolation, hinting at the complex biochemical nature of glycoRNA. Our study underscores the need for further research to elucidate the structural and biochemical properties of glycoRNA.