Fan Yuan;Xiaojian Yang;Shengguo Li;Dezun Dong;Chun Huang;Zheng Wang
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Optimizing Multi-Grid Preconditioned Conjugate Gradient Method on Multi-Cores
Multigrid preconditioned conjugate gradient (MGPCG) is commonly used in high-performance computing (HPC) workloads. However, MGPCG is notoriously challenging to optimize since most of its computation kernels are memory-bounded with low arithmetic intensity and non-trivial communication patterns among parallel processes. This article presents new techniques to improve the data locality and reduce the communication overhead of MGPCG by first merging the kernels of multigrid (MG). We then develop an asynchronous neighboring communication algorithm to reduce the data communications across parallel processes. We demonstrated the benefits of our approach by applying it to the high-performance conjugate gradient (HPCG) benchmark and integrating it with a real-life algebraic multigrid package. We test the resulting software implementations on three ARMv8 and one Intel Xeon system. Experimental results show that our approach leads to a 1.62x-2.54x speedup over the engineer- and vendor-tuned HPCG implementations across various workloads and platforms.
期刊介绍:
IEEE Transactions on Parallel and Distributed Systems (TPDS) is published monthly. It publishes a range of papers, comments on previously published papers, and survey articles that deal with the parallel and distributed systems research areas of current importance to our readers. Particular areas of interest include, but are not limited to:
a) Parallel and distributed algorithms, focusing on topics such as: models of computation; numerical, combinatorial, and data-intensive parallel algorithms, scalability of algorithms and data structures for parallel and distributed systems, communication and synchronization protocols, network algorithms, scheduling, and load balancing.
b) Applications of parallel and distributed computing, including computational and data-enabled science and engineering, big data applications, parallel crowd sourcing, large-scale social network analysis, management of big data, cloud and grid computing, scientific and biomedical applications, mobile computing, and cyber-physical systems.
c) Parallel and distributed architectures, including architectures for instruction-level and thread-level parallelism; design, analysis, implementation, fault resilience and performance measurements of multiple-processor systems; multicore processors, heterogeneous many-core systems; petascale and exascale systems designs; novel big data architectures; special purpose architectures, including graphics processors, signal processors, network processors, media accelerators, and other special purpose processors and accelerators; impact of technology on architecture; network and interconnect architectures; parallel I/O and storage systems; architecture of the memory hierarchy; power-efficient and green computing architectures; dependable architectures; and performance modeling and evaluation.
d) Parallel and distributed software, including parallel and multicore programming languages and compilers, runtime systems, operating systems, Internet computing and web services, resource management including green computing, middleware for grids, clouds, and data centers, libraries, performance modeling and evaluation, parallel programming paradigms, and programming environments and tools.