Favolaschia claudopus CIRM-BRFM 2984 的基因组测序和组装草案，从橡树肢体中分离。

Journal of Genomics Pub Date : 2024-02-17 eCollection Date: 2024-01-01 DOI:10.7150/jgen.92255

David Navarro, Elodie Drula, Delphine Chaduli, Robert Cazenave, Steven Ahrendt, Jie Wang, Anna Lipzen, Chris Daum, Kerrie Barry, Igor V Grigoriev, Anne Favel, Marie-Noëlle Rosso, Francis Martin

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引用次数: 0

摘要

Favolaschia claudopus 是一种生活在木材中的真菌科基生菌，被认为是一种入侵物种，最近已从大洋洲扩散到欧洲。这种真菌的 CIRM-BRFM 2984 菌株最初是从法国西南部一棵腐朽橡树倒下的树枝上采集到的基生体中分离出来的。该菌株的基因组序列与其他真菌科菌种具有相同的特征，包括基因组规模大、蛋白质编码基因含量丰富。本文提供的基因组序列将有助于进一步研究导致 F. claudopus 在全球成功传播的因素。

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Draft genome sequencing and assembly of Favolaschia claudopus CIRM-BRFM 2984 isolated from oak limbs.

Favolaschia claudopus, a wood-inhabiting basidiomycete of the Mycenaceae family, is considered an invasive species that has recently spread from Oceania to Europe. The CIRM-BRFM 2984 strain of this fungus was originally isolated from a basidiome collected from the fallen limb of a decayed oak tree in Southwest France. The genome sequence of this strain shared characteristics with other Mycenaceae species, including a large genome size and enriched content of protein-coding genes. The genome sequence provided here will facilitate further investigation on the factors that contribute to the successful global dissemination of F. claudopus.

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来源期刊

Journal of Genomics

自引率

0.00%

发文量

审稿时长

12 weeks

期刊介绍： Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.