Sadra Samavarchi Tehrani, Hamideh Mahmoodzadeh Hosseini, Seyed Ali Mirhosseini
{"title":"评估一种新型设计肽的抗内毒素活性、溶血活性和细胞毒性:硅学和体外研究","authors":"Sadra Samavarchi Tehrani, Hamideh Mahmoodzadeh Hosseini, Seyed Ali Mirhosseini","doi":"10.1007/s10989-024-10591-0","DOIUrl":null,"url":null,"abstract":"<p>Endotoxin, also identified as lipopolysaccharide (LPS), is considered the pathogenic factor of septic shock triggered by Gram-negative bacteria and generates inflammatory responses. Synthetic peptides have attracted increasing attention from researchers for the blocking of LPS and treatment of sepsis. The aim of the study was to design a novel synthetic anti-endotoxin peptide and evaluate its effect in vitro. To design a new peptide, anti-endotoxin peptides were extracted from the APD3 site. The physicochemical features, secondary structure content, and tertiary structure type of each residue were determined by ProtParam, GOR IV, pep-fold, and I-TASSER. Hemolytic activity and cytotoxicity of the peptide on RAW264.7 cells were assessed by human RBC hemolysis test and MTT assay, respectively. Real-time PCR and western blot were used to evaluate the gene expression of IL-1β, TNF-α, IL-6, IL-10, iNOS, and TLR4, as well as the protein expression of NF-KB(P65), correspondingly. The designed peptide has 13 amino acid residues (GRRWWRFKKWWKF). The second structure of the peptide had 46.15% random coil and 53.85% extended strand. The results of the prediction of the tertiary structure demonstrated the peptide forms an alpha helix structure. It possesses low hemolytic activity and low cytotoxicity against RAW264.7 cells. This peptide remarkably restored LPS-induced TLR4 overexpression, and reduced gene expression of IL-1β, IL-6, iNOS, and TNF-α, whereas increased IL-10. This peptide significantly reduced the protein expression of NF-KB (P65). These findings imply that this peptide with low toxicity, hemolytic activity, and LPS-neutralizing activity merits more research as a possible anti-LPS agent for managing septic shock.</p>","PeriodicalId":14217,"journal":{"name":"International Journal of Peptide Research and Therapeutics","volume":"7 1","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2024-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Evaluation of Anti-endotoxin Activity, Hemolytic Activity, and Cytotoxicity of a Novel Designed Peptide: An In Silico and In Vitro Study\",\"authors\":\"Sadra Samavarchi Tehrani, Hamideh Mahmoodzadeh Hosseini, Seyed Ali Mirhosseini\",\"doi\":\"10.1007/s10989-024-10591-0\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Endotoxin, also identified as lipopolysaccharide (LPS), is considered the pathogenic factor of septic shock triggered by Gram-negative bacteria and generates inflammatory responses. Synthetic peptides have attracted increasing attention from researchers for the blocking of LPS and treatment of sepsis. The aim of the study was to design a novel synthetic anti-endotoxin peptide and evaluate its effect in vitro. To design a new peptide, anti-endotoxin peptides were extracted from the APD3 site. The physicochemical features, secondary structure content, and tertiary structure type of each residue were determined by ProtParam, GOR IV, pep-fold, and I-TASSER. Hemolytic activity and cytotoxicity of the peptide on RAW264.7 cells were assessed by human RBC hemolysis test and MTT assay, respectively. Real-time PCR and western blot were used to evaluate the gene expression of IL-1β, TNF-α, IL-6, IL-10, iNOS, and TLR4, as well as the protein expression of NF-KB(P65), correspondingly. The designed peptide has 13 amino acid residues (GRRWWRFKKWWKF). The second structure of the peptide had 46.15% random coil and 53.85% extended strand. The results of the prediction of the tertiary structure demonstrated the peptide forms an alpha helix structure. It possesses low hemolytic activity and low cytotoxicity against RAW264.7 cells. This peptide remarkably restored LPS-induced TLR4 overexpression, and reduced gene expression of IL-1β, IL-6, iNOS, and TNF-α, whereas increased IL-10. This peptide significantly reduced the protein expression of NF-KB (P65). These findings imply that this peptide with low toxicity, hemolytic activity, and LPS-neutralizing activity merits more research as a possible anti-LPS agent for managing septic shock.</p>\",\"PeriodicalId\":14217,\"journal\":{\"name\":\"International Journal of Peptide Research and Therapeutics\",\"volume\":\"7 1\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2024-02-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Peptide Research and Therapeutics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s10989-024-10591-0\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Peptide Research and Therapeutics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s10989-024-10591-0","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Evaluation of Anti-endotoxin Activity, Hemolytic Activity, and Cytotoxicity of a Novel Designed Peptide: An In Silico and In Vitro Study
Endotoxin, also identified as lipopolysaccharide (LPS), is considered the pathogenic factor of septic shock triggered by Gram-negative bacteria and generates inflammatory responses. Synthetic peptides have attracted increasing attention from researchers for the blocking of LPS and treatment of sepsis. The aim of the study was to design a novel synthetic anti-endotoxin peptide and evaluate its effect in vitro. To design a new peptide, anti-endotoxin peptides were extracted from the APD3 site. The physicochemical features, secondary structure content, and tertiary structure type of each residue were determined by ProtParam, GOR IV, pep-fold, and I-TASSER. Hemolytic activity and cytotoxicity of the peptide on RAW264.7 cells were assessed by human RBC hemolysis test and MTT assay, respectively. Real-time PCR and western blot were used to evaluate the gene expression of IL-1β, TNF-α, IL-6, IL-10, iNOS, and TLR4, as well as the protein expression of NF-KB(P65), correspondingly. The designed peptide has 13 amino acid residues (GRRWWRFKKWWKF). The second structure of the peptide had 46.15% random coil and 53.85% extended strand. The results of the prediction of the tertiary structure demonstrated the peptide forms an alpha helix structure. It possesses low hemolytic activity and low cytotoxicity against RAW264.7 cells. This peptide remarkably restored LPS-induced TLR4 overexpression, and reduced gene expression of IL-1β, IL-6, iNOS, and TNF-α, whereas increased IL-10. This peptide significantly reduced the protein expression of NF-KB (P65). These findings imply that this peptide with low toxicity, hemolytic activity, and LPS-neutralizing activity merits more research as a possible anti-LPS agent for managing septic shock.
期刊介绍:
The International Journal for Peptide Research & Therapeutics is an international, peer-reviewed journal focusing on issues, research, and integration of knowledge on the latest developments in peptide therapeutics. The Journal brings together in a single source the most exciting work in peptide research, including isolation, structural characterization, synthesis and biological activity of peptides, and thereby aids in the development of unifying concepts from diverse perspectives. The Journal invites substantial contributions in the following thematic areas:
-New advances in peptide drug delivery systems.
-Application of peptide therapeutics to specific diseases.
-New advances in synthetic methods.
-The development of new procedures for construction of peptide libraries and methodology for screening of such mixtures.
-The use of peptides in the study of enzyme specificity and mechanism, receptor binding and antibody/antigen interactions
-Applications of such techniques as chromatography, electrophoresis, NMR and X-ray crystallography, mass spectrometry.