利用 QSAR 和化学交叉分析法首次报告杀虫剂对狗的亚慢性和慢性毒性。

IF 2.3 3区 环境科学与生态学 Q3 CHEMISTRY, MULTIDISCIPLINARY
A Kumar, P K Ojha, K Roy
{"title":"利用 QSAR 和化学交叉分析法首次报告杀虫剂对狗的亚慢性和慢性毒性。","authors":"A Kumar, P K Ojha, K Roy","doi":"10.1080/1062936X.2024.2320143","DOIUrl":null,"url":null,"abstract":"<p><p>Excessive use of chemicals is the outcome of the industrialization of agricultural sectors which leads to disturbance of ecological balance. Various agrochemicals are widely used in agricultural fields, urban green areas, and to protect from various pest-associated diseases. Due to their long-term health and environmental hazards, chronic toxicity assessment is crucial. Since in vivo and in vitro toxicity assessments are costly, lengthy, and require a large number of animal experiments, in silico toxicity approaches are better alternatives to save time, cost, and animal experimentation. We have developed the first regression-based 2D-QSAR models using different sub-chronic and chronic toxicity data of pesticides against dogs employing 2D descriptors. From the statistical results (<math><mi>n</mi><mrow><mrow><mi>train</mi></mrow></mrow><mo>=</mo><mn>53</mn><mo>-</mo><mn>62</mn><mo>,</mo><mrow><mrow><mi> </mi></mrow></mrow><mrow><msup><mi>r</mi><mn>2</mn></msup></mrow></math> = 0.614 to 0.754, <math><msubsup><mi>Q</mi><mrow><mrow><mrow><mi>L</mi><mi>O</mi><mi>O</mi></mrow></mrow></mrow><mn>2</mn></msubsup></math> = 0.501 to 0.703 and <math><mrow><mrow><mi> </mi></mrow></mrow><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>1</mn></mrow></mfenced></mrow><mn>2</mn></msubsup></math> = 0.531 to 0.718, <math><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>2</mn></mrow></mfenced></mrow><mn>2</mn></msubsup><mo>=</mo><mn>0.523</mn><mo>-</mo><mn>0.713</mn></math>), it was concluded that the models are robust, reliable, interpretable, and predictive. Similarity-based read-across algorithm was also used to improve the predictivity (<math><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>1</mn></mrow></mfenced></mrow><mn>2</mn></msubsup><mo>=</mo><mn>0.595</mn><mo>-</mo><mn>0.813</mn><mo>,</mo><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>2</mn></mrow></mfenced></mrow><mn>2</mn></msubsup><mo>=</mo><mn>0.573</mn><mo>-</mo><mn>0.809</mn></math>) of the models. 5132 chemicals obtained from the CPDat and 1694 pesticides obtained from the PPDB database were also screened using the developed models, and their predictivity and reliability were checked. Thus, these models will be helpful for eco-toxicological data-gap filling, toxicity prediction of untested pesticides, and development of novel, safer & eco-friendly pesticides.</p>","PeriodicalId":21446,"journal":{"name":"SAR and QSAR in Environmental Research","volume":"35 3","pages":"241-263"},"PeriodicalIF":2.3000,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"First report on pesticide sub-chronic and chronic toxicities against dogs using QSAR and chemical read-across.\",\"authors\":\"A Kumar, P K Ojha, K Roy\",\"doi\":\"10.1080/1062936X.2024.2320143\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Excessive use of chemicals is the outcome of the industrialization of agricultural sectors which leads to disturbance of ecological balance. Various agrochemicals are widely used in agricultural fields, urban green areas, and to protect from various pest-associated diseases. Due to their long-term health and environmental hazards, chronic toxicity assessment is crucial. Since in vivo and in vitro toxicity assessments are costly, lengthy, and require a large number of animal experiments, in silico toxicity approaches are better alternatives to save time, cost, and animal experimentation. We have developed the first regression-based 2D-QSAR models using different sub-chronic and chronic toxicity data of pesticides against dogs employing 2D descriptors. From the statistical results (<math><mi>n</mi><mrow><mrow><mi>train</mi></mrow></mrow><mo>=</mo><mn>53</mn><mo>-</mo><mn>62</mn><mo>,</mo><mrow><mrow><mi> </mi></mrow></mrow><mrow><msup><mi>r</mi><mn>2</mn></msup></mrow></math> = 0.614 to 0.754, <math><msubsup><mi>Q</mi><mrow><mrow><mrow><mi>L</mi><mi>O</mi><mi>O</mi></mrow></mrow></mrow><mn>2</mn></msubsup></math> = 0.501 to 0.703 and <math><mrow><mrow><mi> </mi></mrow></mrow><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>1</mn></mrow></mfenced></mrow><mn>2</mn></msubsup></math> = 0.531 to 0.718, <math><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>2</mn></mrow></mfenced></mrow><mn>2</mn></msubsup><mo>=</mo><mn>0.523</mn><mo>-</mo><mn>0.713</mn></math>), it was concluded that the models are robust, reliable, interpretable, and predictive. Similarity-based read-across algorithm was also used to improve the predictivity (<math><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>1</mn></mrow></mfenced></mrow><mn>2</mn></msubsup><mo>=</mo><mn>0.595</mn><mo>-</mo><mn>0.813</mn><mo>,</mo><msubsup><mi>Q</mi><mrow><mfenced><mrow><mrow><mrow><mi>F</mi></mrow></mrow><mn>2</mn></mrow></mfenced></mrow><mn>2</mn></msubsup><mo>=</mo><mn>0.573</mn><mo>-</mo><mn>0.809</mn></math>) of the models. 5132 chemicals obtained from the CPDat and 1694 pesticides obtained from the PPDB database were also screened using the developed models, and their predictivity and reliability were checked. Thus, these models will be helpful for eco-toxicological data-gap filling, toxicity prediction of untested pesticides, and development of novel, safer & eco-friendly pesticides.</p>\",\"PeriodicalId\":21446,\"journal\":{\"name\":\"SAR and QSAR in Environmental Research\",\"volume\":\"35 3\",\"pages\":\"241-263\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2024-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"SAR and QSAR in Environmental Research\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://doi.org/10.1080/1062936X.2024.2320143\",\"RegionNum\":3,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/2/23 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"SAR and QSAR in Environmental Research","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.1080/1062936X.2024.2320143","RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/2/23 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

过度使用化学品是农业部门工业化的结果,导致生态平衡受到破坏。各种农用化学品被广泛应用于农田、城市绿地,以及防止各种虫害相关疾病。由于其对健康和环境的长期危害,慢性毒性评估至关重要。由于体内和体外毒性评估成本高、时间长,而且需要大量的动物实验,因此硅学毒性方法是节省时间、成本和动物实验的更好替代方法。我们采用二维描述符,利用不同农药对狗的亚慢性和慢性毒性数据,首次建立了基于回归的二维-QSAR 模型。从统计结果(ntrain=53-62,r2=0.614-0.754,QLOO2=0.501-0.703,QF12=0.531-0.718,QF22=0.523-0.713)来看,这些模型是稳健、可靠、可解释和可预测的。基于相似性的读数交叉算法也用于提高模型的预测能力(QF12=0.595-0.813,QF22=0.573-0.809)。利用所建立的模型还筛选了从 CPDat 中获得的 5132 种化学物质和从 PPDB 数据库中获得的 1694 种农药,并检验了它们的预测性和可靠性。因此,这些模型将有助于生态毒理学数据缺口的填补、未测试农药的毒性预测以及新型、更安全和生态友好农药的开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
First report on pesticide sub-chronic and chronic toxicities against dogs using QSAR and chemical read-across.

Excessive use of chemicals is the outcome of the industrialization of agricultural sectors which leads to disturbance of ecological balance. Various agrochemicals are widely used in agricultural fields, urban green areas, and to protect from various pest-associated diseases. Due to their long-term health and environmental hazards, chronic toxicity assessment is crucial. Since in vivo and in vitro toxicity assessments are costly, lengthy, and require a large number of animal experiments, in silico toxicity approaches are better alternatives to save time, cost, and animal experimentation. We have developed the first regression-based 2D-QSAR models using different sub-chronic and chronic toxicity data of pesticides against dogs employing 2D descriptors. From the statistical results (ntrain=53-62,r2 = 0.614 to 0.754, QLOO2 = 0.501 to 0.703 and QF12 = 0.531 to 0.718, QF22=0.523-0.713), it was concluded that the models are robust, reliable, interpretable, and predictive. Similarity-based read-across algorithm was also used to improve the predictivity (QF12=0.595-0.813,QF22=0.573-0.809) of the models. 5132 chemicals obtained from the CPDat and 1694 pesticides obtained from the PPDB database were also screened using the developed models, and their predictivity and reliability were checked. Thus, these models will be helpful for eco-toxicological data-gap filling, toxicity prediction of untested pesticides, and development of novel, safer & eco-friendly pesticides.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.20
自引率
20.00%
发文量
78
审稿时长
>24 weeks
期刊介绍: SAR and QSAR in Environmental Research is an international journal welcoming papers on the fundamental and practical aspects of the structure-activity and structure-property relationships in the fields of environmental science, agrochemistry, toxicology, pharmacology and applied chemistry. A unique aspect of the journal is the focus on emerging techniques for the building of SAR and QSAR models in these widely varying fields. The scope of the journal includes, but is not limited to, the topics of topological and physicochemical descriptors, mathematical, statistical and graphical methods for data analysis, computer methods and programs, original applications and comparative studies. In addition to primary scientific papers, the journal contains reviews of books and software and news of conferences. Special issues on topics of current and widespread interest to the SAR and QSAR community will be published from time to time.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信