杏果酚类成分抗酵素传感、抗生物膜、抗氧化和抑制15-lox特性的计算与实验综合评价

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Hafiz Abdul Rafey, Mohamed El-Shazly, Tooba Khalid, Tanveer Alam, Shah Iram Niaz, Omer Farooq
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引用次数: 0

摘要

本研究对杏树的抗氧化特性和抗菌潜力进行了调查,目的是找到一种基于功能性食品的抗感染线索。此外,本研究还分别使用铜绿假单胞菌(ATCC 15442)和维拉菌(DSM 30191)评估了该植物的生物膜和 QS 抑制潜力。对杏皮的几种馏分进行了初步的抗菌和抗生物膜筛选。在所有馏分中,甲醇和乙酸乙酯馏分对所选菌株具有显著的抗菌活性,其 MIC 值分别为 1.25 mg/dL 和 1.68 mg/dL。同样,在评估抗菌素感应潜力时,甲醇提取物显示出显著的抑制区(14 毫米),对 Violaceum 的抑制率为 58%,而水提取物显示出中等程度的抑制率(32%),抑制区为(4 毫米)。正己烷馏分在这方面的活性最低。在自由基清除能力方面,乙醇馏分显示出最高的自由基清除潜力(IC50μg/mL 13.76 ± 23.61),而水溶液和乙酸乙酯馏分显示出中等至良好的抗氧化性,IC50μg/mL 分别为 26.74 ± 22.00 和 19.49 ± 2.91。随后,对所选化合物进行了推定结合位点筛选和分子对接研究,并进行了酶抑制试验。结果表明,1 号和 5 号化合物与所选靶标(包括人 α- 大豆塬蛋白(PDB ID 1IK3)、定量感应调节因子 LasR (2UV0))的结合口袋中的残基具有负结合能且非常接近,这表明它们与 LasR 2UV0 和 15-脂氧合酶的活性位点具有很高的亲和力和紧密结合能力。计算完成了理化特征和毒性预测。生物活性预测研究表明,所有被选中的植物成分都显示出令人难以置信的生物活性得分。毒性研究发现,所选化合物均无毒性。化合物 4 在体外对 15-脂氧合酶的抑制率最高(69%,最终浓度为 0.037 mM),其次是化合物 5(60%),而在生物膜抑制试验中,化合物 1 的活性最高(IC50 为 0.05 mM),其次是化合物 3(IC50 为 0.07 mM)。因此,可以确定化合物 1 和 3 具有最高的生物膜抑制活性,而化合物 4 和 5 则是具有潜在抗炎特性的强效 15-脂氧合酶抑制剂。建议今后在表征和制剂开发方面进行研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrated computational and experimental evaluation of phenolic constituents of Apricot fruit L. for antiqourum sensing, antibiofilm, antioxidant, and 15-lox inhibitory properties.

The present study investigated the antioxidant profile together with the antibacterial potential of Apricot L. with the aim to find a functional food based anti-infective lead. Additionally the study evaluated the biofilm and QS inhibitory potential of the plant using Pseudomonas aeruginosa (ATCC 15442) and Chromo bacterium Violaceum (DSM 30191) respectively. Several fractions of the peel of Apricot were subjected to initial antimicrobial and antibiofilm screening. Among all the fractions, methanol and ethyl acetate fractions displayed significant antimicrobial activity against the strains selected with MIC values 1.25 mg/dL and 1.68 mg/dL respectively. Similarly, while evaluating antiqourum-sensing potential, methanol extract showed remarkable zone of inhibition (14mm) with Violaceum inhibition (58%) while aqueous part presented moderately good inhibition (32%) with zone of inhibition of (4mm). N-hexane fraction was least active in this regard. In case of free radicals scavenging aptitudes, Ethanolic fraction displayed the highest free radicals scavenging potential (IC50μg/mL 13.76 ± 23.61) while Aqueous and ethyl acetate part exhibited moderate to good antioxidant behaviors with IC50μg/mL of 26.74 ± 22.00 and 19.49 ± 2.91 respectively. Then the selected compounds were screened for putative binding sites and molecular docking studies followed by enzyme inhibition assays. The negative binding energies and close proximity to residues in the binding pocket of selected targets including human α- soybean lox (PDB ID 1IK3), quorum sensing regulators LasR (2UV0) were observed which indicated high affinity and tight binding capacity of compounds 1 and 5 towards the active sites of LasR 2UV0 and 15-lipoxygenase. The physicochemical characteristics and toxicity expectation were computationally accomplished. Bioactivity prediction study revealed that all of the selected Phytoconstituents displayed incredible Bioactivity score. None of the selected chemical compound was found to be toxic as discovered by toxicity studies. Compound 4 exhibited the highest inhibition of 15-lipoxygenase in vitro (69%, at 0.037 mM final concentration) and that is accompanied by compound 5 (60%) whereas in the biofilm inhibition assay, compound 1 was most active (IC50 0.05 mM), followed by compound 3 (IC50 0.07 mM). It was therefore determined that compounds 1 and 3 had the highest biofilm inhibitory activity, whereas compounds 4 and 5 were potent 15-lipoxygenase inhibitors with potentially anti-inflammatory properties. Future investigations are suggested for the characterization and formulation development.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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