BioCARS:用于探测生物大分子结构动力学的同步加速器设施

Robert W. Henning, Irina Kosheleva, Vukica Šrajer, In-Sik Kim, Eric Zoellner, Rama Ranganathan
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摘要

生物医学科学的一个主要目标是超越蛋白质和其他生物大分子的静态图像,研究其功能的内部动态。要了解这些分子是如何工作的,并设计出新的功能和功能调节器,就必须进行这一层次的研究。数十年前,基思-莫法特(Keith Moffat)对这一问题作出了富有远见的承诺,现在,结构生物学家群体已经拥有了一套 X 射线散射技术,可以在原子分辨率和与功能相关的运动的广泛时间尺度范围内观察生物大分子的分子内动力学。其中许多技术由 BioCARS 提供,这是一个在莫法特领导下建立的尖端同步辐射设施,位于阿贡国家实验室的先进光子源。BioCARS 能够进行时间分辨率从 100 ps 到几秒的分子动力学实验研究,并提供时间分辨 X 射线晶体学以及小角和广角 X 射线散射。结构变化可由多种方法引发--利用可调皮秒和纳秒激光脉冲进行紫外/可见光抽运、基底扩散以及电场和温度跃迁等全局扰动。动力学研究通常涉及对分子结构的微妙扰动,需要专门的计算技术来处理和解释数据。在这篇综述中,我们将介绍大分子动力学实验所面临的挑战,并介绍该设施目前的实验能力。正如莫法特多年前所设想的那样,BioCARS 现在的定位是推动科学界在理解蛋白质和其他复杂生物大分子方面取得根本性进展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
BioCARS: Synchrotron facility for probing structural dynamics of biological macromolecules
A major goal in biomedical science is to move beyond static images of proteins and other biological macromolecules to the internal dynamics underlying their function. This level of study is necessary to understand how these molecules work and to engineer new functions and modulators of function. Stemming from a visionary commitment to this problem by Keith Moffat decades ago, a community of structural biologists has now enabled a set of x-ray scattering technologies for observing intramolecular dynamics in biological macromolecules at atomic resolution and over the broad range of timescales over which motions are functionally relevant. Many of these techniques are provided by BioCARS, a cutting-edge synchrotron radiation facility built under Moffat leadership and located at the Advanced Photon Source at Argonne National Laboratory. BioCARS enables experimental studies of molecular dynamics with time resolutions spanning from 100 ps to seconds and provides both time-resolved x-ray crystallography and small- and wide-angle x-ray scattering. Structural changes can be initiated by several methods—UV/Vis pumping with tunable picosecond and nanosecond laser pulses, substrate diffusion, and global perturbations, such as electric field and temperature jumps. Studies of dynamics typically involve subtle perturbations to molecular structures, requiring specialized computational techniques for data processing and interpretation. In this review, we present the challenges in experimental macromolecular dynamics and describe the current state of experimental capabilities at this facility. As Moffat imagined years ago, BioCARS is now positioned to catalyze the scientific community to make fundamental advances in understanding proteins and other complex biological macromolecules.
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