用生物计算方法评估姜黄素对慢性阻塞性肺病的影响

IF 1.2 Q4 GENETICS & HEREDITY
Mohammad Maboudian, Elham Amjad, Solmaz Asnaashari, Siavoush Dastmalchi, Babak Sokouti, Yousef Javadzadeh
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引用次数: 0

摘要

鉴于慢性阻塞性肺病的发病率呈上升趋势,及时诊断和治疗该疾病可以降低医疗系统的高昂成本。因此,通过生物学计算方法,可以获得与该疾病相关的信号通路和基因,并用于设计药物和其他治疗方法。通过生物计算,我们确定姜黄素可以影响这种疾病及其基因和信号通路。我们这项研究的目标是找到姜黄素通过哪些基因产生作用,并能维持皮质类固醇对抗氧化剂的功能。通过找到这些基因,就有可能准确找到姜黄素发挥作用的途径,从而设计出能引起这些途径的其他药物,并将其副作用降到最低。本研究考虑了健康样本(含/不含姜黄素)和无氧自由基样本(含/不含姜黄素)。最后,统计算法提取出有意义的基因作为有效的生物标记,以研究姜黄素对慢性阻塞性肺病的影响和信号通路。结果表明,最终获得的基因是文献证实的最关键基因,对慢性阻塞性肺病有效。最后,姜黄素被输入到 SwissTargetPrediction 中,以确定潜在的蛋白质受体。我们使用 LigPlot+ 软件将 iGEMDOCK 提供的受体-配体结合结果可视化。数据显示,每组中最重要的基因在其他研究中已被证实对该疾病有效,它们之间可以建立蛋白-蛋白相互作用网络,以研究它们的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Evaluation of the effects of curcumin on chronic obstructive pulmonary disease with a bio-computational approach
According to the increasing trend of COPD, the timely diagnosis and treatment of the disease can reduce the high costs to the health systems. Therefore, by biological calculation methods, signaling pathways and genes involved in this disease can be obtained and used to design drugs and other treatment methods. By using biological calculations, we determined that curcumin can affect this disease and its genes and signaling pathways. Our goal in this study was to find the genes by which curcumin exerts its effect and can maintain the function of corticosteroids against oxidizing agents. By finding the genes, it is possible to find precisely the pathways by which curcumin works, which can be used to design other drugs that cause these pathways and minimize their side effects. This study considers healthy samples (with/without curcumin) and oxygen-free radicals (with/without curcumin). Finally, statistical algorithms extract meaningful genes as effective biomarkers to investigate curcumin's effects and signaling pathways in COPD. The results show that the genes finally obtained as the most critical genes confirmed by the literature are effective in COPD. Finally, curcumin was input in SwissTargetPrediction to identify potential protein receptors. We used LigPlot+ software to visualize the receptor–ligand binding result provided by iGEMDOCK. The data showed that the most significant genes in each group have been confirmed in other studies to be effective in this disease, and protein–protein interaction networks can be established between them to investigate their roles.
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来源期刊
Egyptian Journal of Medical Human Genetics
Egyptian Journal of Medical Human Genetics Medicine-Genetics (clinical)
CiteScore
2.20
自引率
7.70%
发文量
150
审稿时长
18 weeks
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