杯突相关特征与头颈部鳞状细胞癌患者预后的关系

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yunshan Li, Caidie Sun, Feihan Gu, Jiayuan Yue, Xu Huang, Bin Yuan, Yuanyin Wang, Ran Chen
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引用次数: 0

摘要

头颈部鳞状细胞癌(HNSCC)患者由于复发率和转移率高而预后不良。杯突症是一种新型的铜依赖性细胞死亡,它不同于细胞凋亡、坏死和细胞灼伤死亡。我们设计并验证了一种用于HNSCC患者风险评估和预后预测的个体化杯突相关基因(CRG)特征。在 HNSCC 中发现了 90 个差异表达的 CRG。通过基因本体(GO)和京都基因组百科全书(KEGG)通路分析,研究了癌症基因组图谱(TCGA)HNSCC队列中CRG的功能参与情况。经过单变量和多变量分析,利用10个基因创建了CRG特征。卡普兰-麦尔(KM)分析表明,高风险组的生存率明显低于低风险组。多变量回归分析发现,基于预后特征的风险评分是HNSCC的独立预后指标。此外,风险模型还与肿瘤突变负荷(TMB)、肿瘤浸润免疫细胞(TICs)、免疫检查点、临床特征和抗肿瘤药物敏感性有关。此外,我们还发现,CuCl2 处理可促进 HNSCC 细胞的杯突症,不同剂量的 CuCl2 会改变杯突症相关基因的表达水平。总之,了解杯突的详细分子机制及其对总生存率(OS)的影响,并确定HNSCC的潜在治疗靶点,将为治疗提供潜在的启示。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Association of cuproptosis-related signature with the prognosis of patients with head and neck squamous cell carcinoma.

Patients with head and neck squamous cell carcinoma (HNSCC) have a poor prognosis because of their high recurrence and metastasis rates. Cuproptosis is a novel type of copper-dependent cell death that differs from apoptosis, necroptosis, and cytosolic scorch death. We designed and validated an individualized cuproptosis-related gene (CRG) signature for risk evaluation and prognostic prediction in HNSCC patients. Ninety differentially expressed CRGs were found in HNSCC. Gene Ontology (GO) and Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway analyses were performed to investigate the functional involvement of CRGs in the Cancer Genome Atlas (TCGA) HNSCC cohort. A CRG signature was created using 10 genes after univariate and multivariate analysis. Kaplan Meier (KM) analysis showed that the survival rate of the high-risk group was significantly lower than that of the low-risk group. Multivariate regression analysis identified risk scores based on prognostic characteristics as independent prognostic indicators of HNSCC. Moreover, risk models are related to tumor mutational burden (TMB), tumor-infiltrating immune cells (TICs), immune checkpoints, clinical characteristics, and antitumor drug susceptibility. Furthermore, we found that CuCl2 treatment promoted cuproptosis in HNSCC cells, and that the expression levels of cuproptosis-related genes were altered by different doses of CuCl2. In summary, understanding the detailed molecular mechanisms of cuproptosis and its impact on overall survival (OS), and identifying potential therapeutic targets for HNSCC will provide potential insights for treatment.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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