细菌趋化连续模型中的感官适应--工作范围、成本-精度关系和耦合系统

Vansh Kharbanda, Benedikt Sabass
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引用次数: 0

摘要

感官适应使生物能够在不断变化的环境中调整自己的感知。细菌趋化作用就是一个范例,在这种作用中,化学感受器的输出活动通过受体甲基化适应不同的基线浓度。内部受体状态的范围限制了这些系统所能适应的刺激强度。在这里,我们采用一个高度理想化的、基于朗格文方程的模型来研究有限的状态变量范围如何影响单个系统和耦合系统的适应精度和能量耗散。维持自适应状态需要持续的能量耗散。我们的研究表明,在所谓的完美适应极限中,对于不同的刺激幅度,稳态耗散率与适应精度近似线性增长。这一结果补充了众所周知的不同化学驱动的对数成本-精度关系。接下来,我们研究了线性耦合的成对感觉单元。我们发现,相互作用降低了每个单元的耗散率,并影响了整体成本-精度关系。与活动耦合相比,慢甲基化变量耦合的准确度更高。总之,这些发现凸显了工作范围和集体运行模式的重要性,它们是影响分子适应网络准确性和能量消耗的关键设计因素。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Sensory adaptation in a continuum model of bacterial chemotaxis -- working range, cost-accuracy relation, and coupled systems
Sensory adaptation enables organisms to adjust their perception in a changing environment. A paradigm is bacterial chemotaxis, where the output activity of chemoreceptors is adapted to different baseline concentrations via receptor methylation. The range of internal receptor states limits the stimulus magnitude to which these systems can adapt. Here, we employ a highly idealized, Langevin-equation based model to study how the finite range of state variables affects the adaptation accuracy and the energy dissipation in individual and coupled systems. Maintaining an adaptive state requires constant energy dissipation. We show that the steady-state dissipation rate increases approximately linearly with the adaptation accuracy for varying stimulus magnitudes in the so-called perfect adaptation limit. This result complements the well-known logarithmic cost-accuracy relationship for varying chemical driving. Next, we study linearly coupled pairs of sensory units. We find that the interaction reduces the dissipation rate per unit and affects the overall cost-accuracy relationship. A coupling of the slow methylation variables results in a better accuracy than a coupling of activities. Overall, the findings highlight the significance of both the working range and collective operation mode as crucial design factors that impact the accuracy and energy expenditure of molecular adaptation networks.
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