Tiago L. Vieira, Gerardo A. Salazar, Cássio van den Berg
{"title":"基于 nrITS 和质体 DNA 序列的 Prosthechea(兰科 Laeliinae)系统发育:重新评估 \"跳跃者-分裂者 \"之争,揭示这一新热带属的进化过程","authors":"Tiago L. Vieira, Gerardo A. Salazar, Cássio van den Berg","doi":"10.1002/tax.13124","DOIUrl":null,"url":null,"abstract":"After a confused taxonomic history, <i>Prosthechea</i> (Laeliinae, Orchidaceae) has been circumscribed in a broad sense to include species previously placed in <i>Encyclia</i> subg. <i>Osmophytum</i>. However, recent alternative classifications resurrecting old names such as <i>Anacheilium</i> and <i>Hormidium</i>, and proposing new genera such as <i>Euchile</i>, <i>Panarica</i>, <i>Pollardia</i>, and <i>Pseudencyclia</i> were presented, splitting <i>Prosthechea</i> into narrower genera. In this study, we provide a molecular phylogeny of <i>Prosthechea</i> to reassess alternative generic classifications and shed light on evolutionary aspects of this highly diverse Neotropical lineage. Eighty species of <i>Prosthechea</i> s.l. and 12 species of related genera were sampled. Bayesian and maximum parsimony analyses of sequences from three plastid regions (<i>rpl32-trnL</i>, <i>trnD-trnT</i>, <i>ycf1</i>) and nrITS were included. Possible conflicts between nuclear and plastid data were assessed with partitioned Bremer support. Ancestral state reconstructions of morphological characters relevant to the genus taxonomy are provided. Our results reinforce the monophyly of the lineage corresponding to a broad circumscription of <i>Prosthechea</i>. The small lineages corresponding to <i>Euchile</i>, <i>Panarica</i>, and <i>Hormidium</i> are monophyletic, whereas the larger <i>Anacheilium</i>, <i>Pollardia</i>, and <i>Pseudencyclia</i> are not monophyletic. Splitting <i>Prosthechea</i> into smaller genera is not supported by our phylogeny, and nonmonophyly also hinders the proposal of a comprehensive infrageneric classification. The phylogenetic relationships recovered reflect better the biogeographic patterns than the previously proposed morphological affinities, pointing to the existence of homoplastic floral traits within the genus. Conflicts between nuclear and plastid partitions were detected, suggesting a possible scenario of reticulate evolution.","PeriodicalId":49448,"journal":{"name":"Taxon","volume":"204 1","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2024-01-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Phylogeny of Prosthechea (Laeliinae, Orchidaceae) based on nrITS and plastid DNA sequences: Reassessing the lumper-splitter debate and shedding light on the evolution of this Neotropical genus\",\"authors\":\"Tiago L. Vieira, Gerardo A. Salazar, Cássio van den Berg\",\"doi\":\"10.1002/tax.13124\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"After a confused taxonomic history, <i>Prosthechea</i> (Laeliinae, Orchidaceae) has been circumscribed in a broad sense to include species previously placed in <i>Encyclia</i> subg. <i>Osmophytum</i>. However, recent alternative classifications resurrecting old names such as <i>Anacheilium</i> and <i>Hormidium</i>, and proposing new genera such as <i>Euchile</i>, <i>Panarica</i>, <i>Pollardia</i>, and <i>Pseudencyclia</i> were presented, splitting <i>Prosthechea</i> into narrower genera. In this study, we provide a molecular phylogeny of <i>Prosthechea</i> to reassess alternative generic classifications and shed light on evolutionary aspects of this highly diverse Neotropical lineage. Eighty species of <i>Prosthechea</i> s.l. and 12 species of related genera were sampled. Bayesian and maximum parsimony analyses of sequences from three plastid regions (<i>rpl32-trnL</i>, <i>trnD-trnT</i>, <i>ycf1</i>) and nrITS were included. Possible conflicts between nuclear and plastid data were assessed with partitioned Bremer support. Ancestral state reconstructions of morphological characters relevant to the genus taxonomy are provided. Our results reinforce the monophyly of the lineage corresponding to a broad circumscription of <i>Prosthechea</i>. The small lineages corresponding to <i>Euchile</i>, <i>Panarica</i>, and <i>Hormidium</i> are monophyletic, whereas the larger <i>Anacheilium</i>, <i>Pollardia</i>, and <i>Pseudencyclia</i> are not monophyletic. Splitting <i>Prosthechea</i> into smaller genera is not supported by our phylogeny, and nonmonophyly also hinders the proposal of a comprehensive infrageneric classification. The phylogenetic relationships recovered reflect better the biogeographic patterns than the previously proposed morphological affinities, pointing to the existence of homoplastic floral traits within the genus. Conflicts between nuclear and plastid partitions were detected, suggesting a possible scenario of reticulate evolution.\",\"PeriodicalId\":49448,\"journal\":{\"name\":\"Taxon\",\"volume\":\"204 1\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2024-01-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Taxon\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1002/tax.13124\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"EVOLUTIONARY BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Taxon","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/tax.13124","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"EVOLUTIONARY BIOLOGY","Score":null,"Total":0}
Phylogeny of Prosthechea (Laeliinae, Orchidaceae) based on nrITS and plastid DNA sequences: Reassessing the lumper-splitter debate and shedding light on the evolution of this Neotropical genus
After a confused taxonomic history, Prosthechea (Laeliinae, Orchidaceae) has been circumscribed in a broad sense to include species previously placed in Encyclia subg. Osmophytum. However, recent alternative classifications resurrecting old names such as Anacheilium and Hormidium, and proposing new genera such as Euchile, Panarica, Pollardia, and Pseudencyclia were presented, splitting Prosthechea into narrower genera. In this study, we provide a molecular phylogeny of Prosthechea to reassess alternative generic classifications and shed light on evolutionary aspects of this highly diverse Neotropical lineage. Eighty species of Prosthechea s.l. and 12 species of related genera were sampled. Bayesian and maximum parsimony analyses of sequences from three plastid regions (rpl32-trnL, trnD-trnT, ycf1) and nrITS were included. Possible conflicts between nuclear and plastid data were assessed with partitioned Bremer support. Ancestral state reconstructions of morphological characters relevant to the genus taxonomy are provided. Our results reinforce the monophyly of the lineage corresponding to a broad circumscription of Prosthechea. The small lineages corresponding to Euchile, Panarica, and Hormidium are monophyletic, whereas the larger Anacheilium, Pollardia, and Pseudencyclia are not monophyletic. Splitting Prosthechea into smaller genera is not supported by our phylogeny, and nonmonophyly also hinders the proposal of a comprehensive infrageneric classification. The phylogenetic relationships recovered reflect better the biogeographic patterns than the previously proposed morphological affinities, pointing to the existence of homoplastic floral traits within the genus. Conflicts between nuclear and plastid partitions were detected, suggesting a possible scenario of reticulate evolution.
期刊介绍:
TAXON is the bi-monthly journal of the International Association for Plant Taxonomy and is devoted to systematic and evolutionary biology with emphasis on plants and fungi. It is published bimonthly by the International Bureau for Plant Taxonomy and Nomenclature, c/o Institute of Botany, Slovak Academy of Sciences, Dúbravská cesta 9, SK-845 23 Bratislava, SLOVAKIA. Details of page charges are given in the Guidelines for authors. Papers will be reviewed by at least two specialists.