用于肾脏肿瘤分割的多尺度和空间信息提取:上下文可变形注意力和边缘增强 U-Net

IF 2.9 2区 工程技术 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Shamija Sherryl R. M. R., Jaya T.
{"title":"用于肾脏肿瘤分割的多尺度和空间信息提取:上下文可变形注意力和边缘增强 U-Net","authors":"Shamija Sherryl R. M. R., Jaya T.","doi":"10.1007/s10278-023-00900-2","DOIUrl":null,"url":null,"abstract":"<p>Kidney tumor segmentation is a difficult task because of the complex spatial and volumetric information present in medical images. Recent advances in deep convolutional neural networks (DCNNs) have improved tumor segmentation accuracy. However, the practical usability of current CNN-based networks is constrained by their high computational complexity. Additionally, these techniques often struggle to make adaptive modifications based on the structure of the tumors, which can lead to blurred edges in segmentation results. A lightweight architecture called the contextual deformable attention and edge-enhanced U-Net (CDA2E-Net) for high-accuracy pixel-level kidney tumor segmentation is proposed to address these challenges. Rather than using complex deep encoders, the approach includes a lightweight depthwise dilated ShuffleNetV2 (LDS-Net) encoder integrated into the CDA2E-Net framework. The proposed method also contains a multiscale attention feature pyramid pooling (MAF2P) module that improves the ability of multiscale features to adapt to various tumor shapes. Finally, an edge-enhanced loss function is introduced to guide the CDA2E-Net to concentrate on tumor edge information. The CDA2E-Net is evaluated on the KiTS19 and KiTS21 datasets, and the results demonstrate its superiority over existing approaches in terms of Hausdorff distance (HD), intersection over union (IoU), and dice coefficient (DSC) metrics.</p>","PeriodicalId":50214,"journal":{"name":"Journal of Digital Imaging","volume":"39 1","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2024-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Multi-Scale and Spatial Information Extraction for Kidney Tumor Segmentation: A Contextual Deformable Attention and Edge-Enhanced U-Net\",\"authors\":\"Shamija Sherryl R. M. R., Jaya T.\",\"doi\":\"10.1007/s10278-023-00900-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Kidney tumor segmentation is a difficult task because of the complex spatial and volumetric information present in medical images. Recent advances in deep convolutional neural networks (DCNNs) have improved tumor segmentation accuracy. However, the practical usability of current CNN-based networks is constrained by their high computational complexity. Additionally, these techniques often struggle to make adaptive modifications based on the structure of the tumors, which can lead to blurred edges in segmentation results. A lightweight architecture called the contextual deformable attention and edge-enhanced U-Net (CDA2E-Net) for high-accuracy pixel-level kidney tumor segmentation is proposed to address these challenges. Rather than using complex deep encoders, the approach includes a lightweight depthwise dilated ShuffleNetV2 (LDS-Net) encoder integrated into the CDA2E-Net framework. The proposed method also contains a multiscale attention feature pyramid pooling (MAF2P) module that improves the ability of multiscale features to adapt to various tumor shapes. Finally, an edge-enhanced loss function is introduced to guide the CDA2E-Net to concentrate on tumor edge information. The CDA2E-Net is evaluated on the KiTS19 and KiTS21 datasets, and the results demonstrate its superiority over existing approaches in terms of Hausdorff distance (HD), intersection over union (IoU), and dice coefficient (DSC) metrics.</p>\",\"PeriodicalId\":50214,\"journal\":{\"name\":\"Journal of Digital Imaging\",\"volume\":\"39 1\",\"pages\":\"\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2024-01-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Digital Imaging\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1007/s10278-023-00900-2\",\"RegionNum\":2,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Digital Imaging","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1007/s10278-023-00900-2","RegionNum":2,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
引用次数: 0

摘要

由于医学图像中存在复杂的空间和体积信息,因此肾脏肿瘤分割是一项艰巨的任务。深度卷积神经网络(DCNN)的最新进展提高了肿瘤分割的准确性。然而,目前基于 CNN 的网络的实际可用性受到了其高计算复杂性的限制。此外,这些技术往往难以根据肿瘤的结构进行自适应修改,从而导致分割结果中的边缘模糊不清。为了应对这些挑战,我们提出了一种用于高精度像素级肾脏肿瘤分割的轻量级架构,即上下文可变形注意力和边缘增强 U-Net(CDA2E-Net)。该方法不使用复杂的深度编码器,而是在 CDA2E-Net 框架中集成了轻量级深度扩张 ShuffleNetV2 (LDS-Net) 编码器。该方法还包含一个多尺度注意力特征金字塔池(MAF2P)模块,可提高多尺度特征适应各种肿瘤形状的能力。最后,还引入了边缘增强损失函数,引导 CDA2E-Net 专注于肿瘤边缘信息。在 KiTS19 和 KiTS21 数据集上对 CDA2E-Net 进行了评估,结果表明它在豪斯多夫距离 (HD)、交集大于联合 (IoU) 和骰子系数 (DSC) 指标方面优于现有方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Multi-Scale and Spatial Information Extraction for Kidney Tumor Segmentation: A Contextual Deformable Attention and Edge-Enhanced U-Net

Multi-Scale and Spatial Information Extraction for Kidney Tumor Segmentation: A Contextual Deformable Attention and Edge-Enhanced U-Net

Kidney tumor segmentation is a difficult task because of the complex spatial and volumetric information present in medical images. Recent advances in deep convolutional neural networks (DCNNs) have improved tumor segmentation accuracy. However, the practical usability of current CNN-based networks is constrained by their high computational complexity. Additionally, these techniques often struggle to make adaptive modifications based on the structure of the tumors, which can lead to blurred edges in segmentation results. A lightweight architecture called the contextual deformable attention and edge-enhanced U-Net (CDA2E-Net) for high-accuracy pixel-level kidney tumor segmentation is proposed to address these challenges. Rather than using complex deep encoders, the approach includes a lightweight depthwise dilated ShuffleNetV2 (LDS-Net) encoder integrated into the CDA2E-Net framework. The proposed method also contains a multiscale attention feature pyramid pooling (MAF2P) module that improves the ability of multiscale features to adapt to various tumor shapes. Finally, an edge-enhanced loss function is introduced to guide the CDA2E-Net to concentrate on tumor edge information. The CDA2E-Net is evaluated on the KiTS19 and KiTS21 datasets, and the results demonstrate its superiority over existing approaches in terms of Hausdorff distance (HD), intersection over union (IoU), and dice coefficient (DSC) metrics.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Digital Imaging
Journal of Digital Imaging 医学-核医学
CiteScore
7.50
自引率
6.80%
发文量
192
审稿时长
6-12 weeks
期刊介绍: The Journal of Digital Imaging (JDI) is the official peer-reviewed journal of the Society for Imaging Informatics in Medicine (SIIM). JDI’s goal is to enhance the exchange of knowledge encompassed by the general topic of Imaging Informatics in Medicine such as research and practice in clinical, engineering, and information technologies and techniques in all medical imaging environments. JDI topics are of interest to researchers, developers, educators, physicians, and imaging informatics professionals. Suggested Topics PACS and component systems; imaging informatics for the enterprise; image-enabled electronic medical records; RIS and HIS; digital image acquisition; image processing; image data compression; 3D, visualization, and multimedia; speech recognition; computer-aided diagnosis; facilities design; imaging vocabularies and ontologies; Transforming the Radiological Interpretation Process (TRIP™); DICOM and other standards; workflow and process modeling and simulation; quality assurance; archive integrity and security; teleradiology; digital mammography; and radiological informatics education.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信