结合药效学、代谢组学、网络药理学、分子生物学实验和分子对接策略揭示湘秦艽颗粒对发热幼鼠的解热作用

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xiying He, Jieqiong Cui, Huayan Li, Yang Zhou, Xinchen Wu, Chunrong Jiang, Zhichang Xu, Ruirui Wang, Lei Xiong
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Subsequently, MetScape was used to jointly analyze targets from network pharmacology and metabolites from metabolomics. Finally, the key targets were validated by enzyme-linked immunosorbent assay (ELISA), and the affinity and stability of key ingredient and targets were evaluated by molecular docking and MD simulation. The animal experimental results showed that after XQJRG treatment, body temperature of febrile rats was significantly reduced, 13 metabolites were significantly modulated, and pathways of differential metabolite enrichment were mainly related to amino acid and lipid metabolism. Network pharmacology results indicated that quercetin and kaempferol were the key active components of XQJRG, <i>TNF</i>, <i>AKT1</i>, <i>IL6</i>, <i>IL1B</i> and <i>PTGS2</i> were core targets. ELISA confirmed that XQJRG significantly reduced the plasma concentrations of IL-1β, IL-6, and TNF-α, and the hypothalamic concentrations of COX-2 and PGE2. 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引用次数: 0

摘要

湘秦艽颗粒(XQJRG)是一种治疗小儿感冒发烧的中成药,但其作用机制尚不清楚。本研究的目的是基于药效学、非靶向代谢组学、网络药理学、分子生物学实验、分子对接和分子动力学(MD)模拟,探讨香蟾酥颗粒的解热机制。首先,在幼年大鼠中构建酵母诱导的发热模型,研究XQJRG的解热作用。通过代谢组学和网络药理学研究,确定了参与XQJRG解热作用的关键化合物、靶点和通路。随后,使用 MetScape 联合分析网络药理学中的靶点和代谢组学中的代谢物。最后,通过酶联免疫吸附试验(ELISA)验证了关键靶点,并通过分子对接和MD模拟评估了关键成分与靶点的亲和力和稳定性。动物实验结果表明,XQJRG治疗后,发热大鼠体温明显降低,13种代谢物受到显著调节,差异代谢物富集的途径主要与氨基酸和脂质代谢有关。网络药理学结果表明,槲皮素和山奈酚是XQJRG的关键活性成分,TNF、AKT1、IL6、IL1B和PTGS2是其核心靶点。酶联免疫吸附试验证实,XQJRG能显著降低血浆中IL-1β、IL-6和TNF-α的浓度,以及下丘脑中COX-2和PGE2的浓度。分子对接表明,山奈酚与核心靶点的结合能均低于-5.0 kcal/mol。MD 模拟结果显示,TNF-山奈酚、IL6-山奈酚、IL1B-山奈酚和 PTGS2- 山奈酚的结合自由能分别为 -87.86 kcal/mol、-70.41 kcal/mol、-69.95 kcal/mol 和 -106.67 kcal/mol。总之,XQJRG对酵母菌引起的幼鼠发热有解热作用,其解热机制可能与山奈酚等成分抑制外周致热细胞因子的释放、减少下丘脑发热介质的产生以及改善氨基酸和脂质代谢紊乱有关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Antipyretic effects of Xiangqin Jiere granules on febrile young rats revealed by combining pharmacodynamics, metabolomics, network pharmacology, molecular biology experiments and molecular docking strategies.

Xiangqin Jiere granules (XQJRG) is a proprietary Chinese medicine treating children's colds and fevers, but its mechanism of action is unclear. The aim of this study was to explore the antipyretic mechanisms of XQJRG based on pharmacodynamics, non-targeted metabolomics, network pharmacology, molecular biology experiments, molecular docking, and molecular dynamics (MD) simulation. Firstly, the yeast-induced fever model was constructed in young rats to study antipyretic effect of XQJRG. Metabolomics and network pharmacology studies were performed to identify the key compounds, targets and pathways involved in the antipyretic of XQJRG. Subsequently, MetScape was used to jointly analyze targets from network pharmacology and metabolites from metabolomics. Finally, the key targets were validated by enzyme-linked immunosorbent assay (ELISA), and the affinity and stability of key ingredient and targets were evaluated by molecular docking and MD simulation. The animal experimental results showed that after XQJRG treatment, body temperature of febrile rats was significantly reduced, 13 metabolites were significantly modulated, and pathways of differential metabolite enrichment were mainly related to amino acid and lipid metabolism. Network pharmacology results indicated that quercetin and kaempferol were the key active components of XQJRG, TNF, AKT1, IL6, IL1B and PTGS2 were core targets. ELISA confirmed that XQJRG significantly reduced the plasma concentrations of IL-1β, IL-6, and TNF-α, and the hypothalamic concentrations of COX-2 and PGE2. Molecular docking demonstrated that the binding energies of kaempferol to the core targets were all below -5.0 kcal/mol. MD simulation results showed that the binding free energies of TNF-kaempferol, IL6-kaempferol, IL1B-kaempferol and PTGS2-kaempferol were -87.86 kcal/mol, -70.41 kcal/mol, -69.95 kcal/mol and -106.67 kcal/mol, respectively. In conclusion, XQJRG has antipyretic effects on yeast-induced fever in young rats, and its antipyretic mechanisms may be related to the inhibition of peripheral pyrogenic cytokines release by constituents such as kaempferol, the reduction of hypothalamic fever mediator production, and the amelioration of disturbances in amino acid and lipid metabolism.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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