神经毒剂对乙酰胆碱酯酶(AChE)的分子对接和毒性研究。

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Mikael Ham Sembiring, Okta Nursanti, Tesia Aisyah Rahmania
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引用次数: 0

摘要

乙酰胆碱酯酶(AChE)是一种胆碱能酶,在自主神经系统中发挥着重要作用。这种酶通常是许多神经毒剂的靶标。当这种酶受到抑制时,其水解乙酰胆碱的功能就会停止,从而使乙酰胆碱在组织中积聚,造成长时间的刺激。一些重要的神经毒剂包括沙林(GB)、索曼(GD)、塔崩(GA)和毒液剂(VX)。为了确定哪种化合物最稳定、亲和力最强,我们将神经毒剂毒液(VX)、沙林(GB)、索曼(GD)和塔崩(GA)与乙酰胆碱酯酶(AChE)对接。之后,将对所选化合物的 17 个靶点进行毒性测试。对接程序使用的软件是 Autodock Vina 1.2.0,分析时使用 Pymol 程序 2.5.4 版,对接结果的可视化使用 Ligplot 软件 2.2 版。使用 Insilico 的 "毒性预测 "算法来确定各种物质的毒性。根据分子对接的结果,多奈哌齐、沙林(GB)、索曼(GD)、塔崩(GA)和毒液(VX)的自由结合能(kcal/mol)分别为-12,3、-4.8、-6.0、-5,1 和 -6.3。最后,四种配体与多奈哌齐受体的结合强度为 RMSD 0.327 Å,与其他测试配体相比,毒液(VX)化合物的结合强度最大。此外,在具有神经毒性的 VX 化合物的毒性测试中,没有观察到其对特定器官和靶点有毒性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular docking and toxicity studies of nerve agents against acetylcholinesterase (AChE).

Acetylcholinesterase (AChE) is a cholinergic enzyme that plays an essential role in the autonomic nervous system. This enzyme is often the target of many nerve agents. When this enzyme is inhibited, its function to hydrolyze acetylcholine is stopped, accumulating the acetylcholine in the tissue and causing prolonged stimulation. Some of the significant nerve agents include sarin (GB), soman (GD), tabun (GA), and venomous agent (VX). In order to determine which compound is the most stable and has the best affinity, the nerve agent venomous agent (VX), sarin (GB), soman (GD), and tabun (GA) are docked to the acetylcholinesterase (AChE) enzyme. After that, toxicity tests will be performed on 17 targets for the compound that was chosen. Autodock Vina 1.2.0 is the software used for the docking procedure. should use the Pymol program version 2.5.4 for analysis and the Ligplot software version 2.2 for visualization of the docking findings. The 'Tox Prediction' algorithm from Insilico was used to determine the toxicity of various substances. Based on the results of molecular docking, the free binding energy of Donepezil, sarin (GB), soman (GD), tabun (GA), and venomous agent (VX) in kcal/mol are -12,3, -4.8, -6.0, -5,1, and -6.3 respectively. Finally, four ligands bind strongly to the receptor Donepezil at RMSD 0.327 Å, and the venomous agent (VX) compound binds the most strongly compared to the other test ligands. Furthermore, in the toxicity test of Compound VX, which exhibits neurotoxic activity, no toxic activity was observed on specific organs and targets.

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来源期刊
Journal of Receptors and Signal Transduction
Journal of Receptors and Signal Transduction 生物-生化与分子生物学
CiteScore
6.60
自引率
0.00%
发文量
19
审稿时长
>12 weeks
期刊介绍: Journal of Receptors and Signal Tranduction is included in the following abstracting and indexing services: BIOBASE; Biochemistry and Biophysics Citation Index; Biological Abstracts; BIOSIS Full Coverage Shared; BIOSIS Previews; Biotechnology Abstracts; Current Contents/Life Sciences; Derwent Chimera; Derwent Drug File; EMBASE; EMBIOLOGY; Journal Citation Reports/ Science Edition; PubMed/MedLine; Science Citation Index; SciSearch; SCOPUS; SIIC.
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