针对 PTP1B 蛋白的香蕉(麝香草属)果皮潜在抗糖尿病酚类化合物的硅学筛选

Q4 Agricultural and Biological Sciences
Rico Alexander Pratama, J. Astina, A. A. Parikesit
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引用次数: 0

摘要

2 型糖尿病(T2DM)是一个全球性问题,发病率越来越高。目前的治疗方法取得了巨大进步,但也存在一些副作用,如耐药性、急性肾毒性和增加心脏病发作的风险。占香蕉果实 40% 的香蕉(Musa spp.)皮含有大量酚类化合物,一些研究表明酚类化合物与抗糖尿病活性之间存在相关性。PTP1B (PDB ID:2NT7)是已被确定为潜在抗糖尿病治疗的新型蛋白质靶点之一。因此,本研究旨在从香蕉皮中的酚类化合物中筛选出潜在的 PTP1B 抑制剂,用于抗糖尿病治疗。本研究采用 QSAR、分子对接、ADME-Tox 和分子动力学分析方法对香蕉皮中的 43 种酚类化合物进行了研究。通过 QSAR 分析筛选出了 18 个配体,其中 8 个配体在分子对接中的结合能低于标准配体(ertiprotafib),而尿石脂 A 和菊黄素的结合能最低。这两种药物都通过了利宾斯基的 5 项规则,具有良好的肠道吸收性和无血脑屏障穿透性,但其致突变性、致癌性以及对皮肤和眼睛的刺激性仍然存在问题。分子动力学分析发现,这两种药物都与 PTP1B 存在稳定的构象。这项研究表明,尿石素 A 和菊黄素有可能作为 PTP1B 抑制剂用于抗糖尿病治疗。此外,还需要进一步的实验来验证这一发现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In silico Screening of Potential Antidiabetic Phenolic Compounds from Banana (Musa spp.) Peel Against PTP1B Protein
Type 2 diabetes mellitus (T2DM) is a global problem with increasing prevalence. The current treatments have made an immense progress  with some side effects, such as drug resistance, acute kidney toxicity, and increased risk of heart attack. Banana (Musa spp.) peel comprises 40% of banana fruit contains high phenolic compounds whilst some studies have suggested a correlation between phenolic compounds and antidiabetic activity. One of the novel protein targets that has been identified as a potential anti-diabetic treatment is PTP1B (PDB ID:2NT7). Therefore, this study aimed to screen the potential PTP1B inhibitor for antidiabetic treatment from phenolic compounds in banana peel. QSAR, molecular docking, ADME-Tox, and molecular dynamics analysis were deployed to examine forty-three phenolic compounds in banana peel. Eighteen ligands were screened by QSAR analysis and eight of them had a lower binding energy than the standard (ertiprotafib) in molecular docking, with urolithin A and chrysin were the lowest. Both passed Lipinski’s rule of five, had a good intestinal absorption, and no blood-brain barrier penetration, however, their mutagenicity, carcinogenicity, and irritation to the skin and eyes were still in questions. Molecular dynamics analysis found both of them were in a stable conformation with PTP1B. This study suggested a potential of urolithin A and chrysin as PTP1B inhibitor for antidiabetic treatment. Additionally, further experimentation is required to validate this finding.
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来源期刊
Journal of Tropical Biodiversity and Biotechnology
Journal of Tropical Biodiversity and Biotechnology Immunology and Microbiology-Applied Microbiology and Biotechnology
CiteScore
1.10
自引率
0.00%
发文量
40
审稿时长
12 weeks
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