根据牙周微生物组元基因组分析牙周炎和糖尿病患者的丝状菌属

Tat'yana Victorovna Tsareva, O. Yanushevich, V. Tsarev, M. Podporin, I. Balmasova
{"title":"根据牙周微生物组元基因组分析牙周炎和糖尿病患者的丝状菌属","authors":"Tat'yana Victorovna Tsareva, O. Yanushevich, V. Tsarev, M. Podporin, I. Balmasova","doi":"10.36233/0372-9311-428","DOIUrl":null,"url":null,"abstract":"Periodontal disease is a widespread pathology, and chronic periodontitis is the most severe form of its manifestation. In recent years, the problem of this polymicrobial disease has acquired particular importance due to the possibility of developing concomitant systemic effects. Quite often, chronic periodontitis is combined with type 2 diabetes mellitus. The etiopathogenetic mechanisms that determine this association include so-called periodontal pathogenic bacteria, with the recently discovered periodontal pathogen Filifactor alocis being the least studied. The purpose of the study is identification of bacteria of genus Filifactor in the periodontal microbiome in the association of chronic periodontitis and type 2 diabetes mellitus and clarification of the mechanisms of their possible influence on associated metabolic processes based on comparative metagenomic analysis. Materials and methods..A metagenomic study of periodontal pocket microbiome samples from 28 chronic periodontitis and diabetes mellitus type 2 association patients and 22 chronic periodontitis patients, as well as the periodontal sulcus microbiome from 19 clinically healthy individuals, was conducted. To determine the taxonomic composition of the microbiome, 16S sequencing of the ribosomal RNA gene was used, and metabolic pathways involving the microbiome were predicted using the shotgun method. The results obtained made it possible to establish that the most common microorganism in the association of chronic periodontitis and type 2 diabetes mellitus were Filifactor genus bacteria. The percentage of their registration correlated with low rates of metagenomic prediction of fatty acid biosynthesis and pyrimidine metabolism in lesions. Conclusion. The frequency of occurrence of Filifactor genus bacteria in patients with the association of chronic periodontitis and type 2 diabetes mellitus was associated with negative correlations with certain features of the putative metabolic pathways of the microbiome, which included fatty acid biosynthesis and pyrimidine metabolism.","PeriodicalId":508236,"journal":{"name":"Journal of microbiology, epidemiology and immunobiology","volume":"21 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"BACTERIA GENUS FILIFACTOR IN PATIENTS WITH PERIODONTITIS AND DIABETES MELLITUS ACCORDING TO METAGENOMIC ANALYSIS OF THE PERIODONTAL MICROBIOME\",\"authors\":\"Tat'yana Victorovna Tsareva, O. Yanushevich, V. Tsarev, M. Podporin, I. Balmasova\",\"doi\":\"10.36233/0372-9311-428\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Periodontal disease is a widespread pathology, and chronic periodontitis is the most severe form of its manifestation. In recent years, the problem of this polymicrobial disease has acquired particular importance due to the possibility of developing concomitant systemic effects. Quite often, chronic periodontitis is combined with type 2 diabetes mellitus. The etiopathogenetic mechanisms that determine this association include so-called periodontal pathogenic bacteria, with the recently discovered periodontal pathogen Filifactor alocis being the least studied. The purpose of the study is identification of bacteria of genus Filifactor in the periodontal microbiome in the association of chronic periodontitis and type 2 diabetes mellitus and clarification of the mechanisms of their possible influence on associated metabolic processes based on comparative metagenomic analysis. Materials and methods..A metagenomic study of periodontal pocket microbiome samples from 28 chronic periodontitis and diabetes mellitus type 2 association patients and 22 chronic periodontitis patients, as well as the periodontal sulcus microbiome from 19 clinically healthy individuals, was conducted. To determine the taxonomic composition of the microbiome, 16S sequencing of the ribosomal RNA gene was used, and metabolic pathways involving the microbiome were predicted using the shotgun method. The results obtained made it possible to establish that the most common microorganism in the association of chronic periodontitis and type 2 diabetes mellitus were Filifactor genus bacteria. The percentage of their registration correlated with low rates of metagenomic prediction of fatty acid biosynthesis and pyrimidine metabolism in lesions. Conclusion. The frequency of occurrence of Filifactor genus bacteria in patients with the association of chronic periodontitis and type 2 diabetes mellitus was associated with negative correlations with certain features of the putative metabolic pathways of the microbiome, which included fatty acid biosynthesis and pyrimidine metabolism.\",\"PeriodicalId\":508236,\"journal\":{\"name\":\"Journal of microbiology, epidemiology and immunobiology\",\"volume\":\"21 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-12-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of microbiology, epidemiology and immunobiology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.36233/0372-9311-428\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of microbiology, epidemiology and immunobiology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.36233/0372-9311-428","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

牙周病是一种广泛存在的病理现象,而慢性牙周炎是其最严重的表现形式。近年来,这种多微生物疾病的问题变得尤为重要,因为它有可能并发全身性影响。慢性牙周炎往往与 2 型糖尿病同时存在。决定这种关联的病因机制包括所谓的牙周致病菌,而最近发现的牙周致病菌 Filifactor alocis 是研究最少的一种。本研究的目的是鉴定牙周微生物组中与慢性牙周炎和 2 型糖尿病相关的 Filifactor 属细菌,并根据元基因组比较分析阐明它们对相关代谢过程的可能影响机制。材料和方法......对 28 名慢性牙周炎和 2 型糖尿病关联患者和 22 名慢性牙周炎患者的牙周袋微生物组样本以及 19 名临床健康人的牙周沟微生物组进行了元基因组研究。为了确定微生物组的分类组成,使用了核糖体 RNA 基因的 16S 测序,并使用射枪法预测了微生物组的代谢途径。研究结果表明,在慢性牙周炎与 2 型糖尿病的关系中,最常见的微生物是 Filifactor 属细菌。它们的登记比例与病变中脂肪酸生物合成和嘧啶代谢的低元基因组预测率相关。结论慢性牙周炎和2型糖尿病患者体内Filifactor属细菌的出现频率与微生物组推测代谢途径的某些特征呈负相关,其中包括脂肪酸生物合成和嘧啶代谢。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
BACTERIA GENUS FILIFACTOR IN PATIENTS WITH PERIODONTITIS AND DIABETES MELLITUS ACCORDING TO METAGENOMIC ANALYSIS OF THE PERIODONTAL MICROBIOME
Periodontal disease is a widespread pathology, and chronic periodontitis is the most severe form of its manifestation. In recent years, the problem of this polymicrobial disease has acquired particular importance due to the possibility of developing concomitant systemic effects. Quite often, chronic periodontitis is combined with type 2 diabetes mellitus. The etiopathogenetic mechanisms that determine this association include so-called periodontal pathogenic bacteria, with the recently discovered periodontal pathogen Filifactor alocis being the least studied. The purpose of the study is identification of bacteria of genus Filifactor in the periodontal microbiome in the association of chronic periodontitis and type 2 diabetes mellitus and clarification of the mechanisms of their possible influence on associated metabolic processes based on comparative metagenomic analysis. Materials and methods..A metagenomic study of periodontal pocket microbiome samples from 28 chronic periodontitis and diabetes mellitus type 2 association patients and 22 chronic periodontitis patients, as well as the periodontal sulcus microbiome from 19 clinically healthy individuals, was conducted. To determine the taxonomic composition of the microbiome, 16S sequencing of the ribosomal RNA gene was used, and metabolic pathways involving the microbiome were predicted using the shotgun method. The results obtained made it possible to establish that the most common microorganism in the association of chronic periodontitis and type 2 diabetes mellitus were Filifactor genus bacteria. The percentage of their registration correlated with low rates of metagenomic prediction of fatty acid biosynthesis and pyrimidine metabolism in lesions. Conclusion. The frequency of occurrence of Filifactor genus bacteria in patients with the association of chronic periodontitis and type 2 diabetes mellitus was associated with negative correlations with certain features of the putative metabolic pathways of the microbiome, which included fatty acid biosynthesis and pyrimidine metabolism.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信