Faisal F Albaqami, Ameer S Sahib, Khalid M Alharthy, Ali Altharawi, Mohammad Y Alshahrani, Mohammed Abed Jawad, Muath Suliman, Irfan Ahmad
{"title":"基于菲罗啉的铒 (III) 复合物:分子对接、DNA/BSA 结合和生物学评价。","authors":"Faisal F Albaqami, Ameer S Sahib, Khalid M Alharthy, Ali Altharawi, Mohammad Y Alshahrani, Mohammed Abed Jawad, Muath Suliman, Irfan Ahmad","doi":"10.1080/07391102.2023.2300130","DOIUrl":null,"url":null,"abstract":"<p><p>With the help of both theoretical as well as experimental research, <i>in vitro</i> binding research with CT-DNA (calf thymus) and BSA (bovine serum albumin) were carefully examined to figure out the chemotherapeutic and pharmacokinetic facets of the Erbium complex, which contains 1,10-phenanthroline (Phen). The binding characteristics and the mechanism of complex's interaction with DNA as well as the protein were determined utilizing fluorescence quenching method. Findings indicated that the complex's interaction with DNA <i>via</i> groove binding into DNA's minor grooves, with their binding constants falling within the 10<sup>4</sup> M<sup>-1</sup> range. Furthermore, thermodynamic characteristics and the fluorescence emission of the tryptophan residues of the protein were obtained through fluorescence quenching studies at different temperatures. According to the results of the binding constants, the protein's interactions with the Er- complex were moderate, demonstrating that the compound may be transported effectively by the protein. Molecular docking results supported that of the experimental research. The HeLa and MCF-7 cancer cell lines, along with the normal human fibroblast cell line, were used in an MTT assay evaluation of the Er-complex cytotoxicity. The Er-complex displayed a selective inhibitory effect on the proliferation of different cancer cells.</p>","PeriodicalId":15272,"journal":{"name":"Journal of Biomolecular Structure & Dynamics","volume":" ","pages":"3873-3885"},"PeriodicalIF":2.7000,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A phenanthroline-based erbium (III) complex: molecular docking, DNA/BSA -binding and biological evaluation.\",\"authors\":\"Faisal F Albaqami, Ameer S Sahib, Khalid M Alharthy, Ali Altharawi, Mohammad Y Alshahrani, Mohammed Abed Jawad, Muath Suliman, Irfan Ahmad\",\"doi\":\"10.1080/07391102.2023.2300130\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>With the help of both theoretical as well as experimental research, <i>in vitro</i> binding research with CT-DNA (calf thymus) and BSA (bovine serum albumin) were carefully examined to figure out the chemotherapeutic and pharmacokinetic facets of the Erbium complex, which contains 1,10-phenanthroline (Phen). The binding characteristics and the mechanism of complex's interaction with DNA as well as the protein were determined utilizing fluorescence quenching method. Findings indicated that the complex's interaction with DNA <i>via</i> groove binding into DNA's minor grooves, with their binding constants falling within the 10<sup>4</sup> M<sup>-1</sup> range. Furthermore, thermodynamic characteristics and the fluorescence emission of the tryptophan residues of the protein were obtained through fluorescence quenching studies at different temperatures. According to the results of the binding constants, the protein's interactions with the Er- complex were moderate, demonstrating that the compound may be transported effectively by the protein. Molecular docking results supported that of the experimental research. The HeLa and MCF-7 cancer cell lines, along with the normal human fibroblast cell line, were used in an MTT assay evaluation of the Er-complex cytotoxicity. The Er-complex displayed a selective inhibitory effect on the proliferation of different cancer cells.</p>\",\"PeriodicalId\":15272,\"journal\":{\"name\":\"Journal of Biomolecular Structure & Dynamics\",\"volume\":\" \",\"pages\":\"3873-3885\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomolecular Structure & Dynamics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/07391102.2023.2300130\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/4 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomolecular Structure & Dynamics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/07391102.2023.2300130","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/4 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
在理论和实验研究的帮助下,对铒复合物与 CT-DNA(小牛胸腺)和 BSA(牛血清白蛋白)的体外结合研究进行了仔细研究,以找出含有 1,10-菲罗啉(Phen)的铒复合物的化疗和药代动力学方面的问题。利用荧光淬灭法测定了复合物与 DNA 和蛋白质的结合特性和相互作用机制。研究结果表明,复合物与 DNA 的相互作用是通过沟槽结合到 DNA 的小沟槽中,其结合常数在 104 M-1 范围内。此外,通过不同温度下的荧光淬灭研究,还获得了该蛋白质色氨酸残基的热力学特征和荧光发射情况。根据结合常数的结果,蛋白质与 Er-复合物的相互作用是中等的,这表明该化合物可以通过蛋白质有效地转运。分子对接结果支持了实验研究。我们用 HeLa 和 MCF-7 癌细胞株以及正常人成纤维细胞株进行了 MTT 试验,以评估 Er 复合物的细胞毒性。Er 复合物对不同癌细胞的增殖具有选择性抑制作用。
A phenanthroline-based erbium (III) complex: molecular docking, DNA/BSA -binding and biological evaluation.
With the help of both theoretical as well as experimental research, in vitro binding research with CT-DNA (calf thymus) and BSA (bovine serum albumin) were carefully examined to figure out the chemotherapeutic and pharmacokinetic facets of the Erbium complex, which contains 1,10-phenanthroline (Phen). The binding characteristics and the mechanism of complex's interaction with DNA as well as the protein were determined utilizing fluorescence quenching method. Findings indicated that the complex's interaction with DNA via groove binding into DNA's minor grooves, with their binding constants falling within the 104 M-1 range. Furthermore, thermodynamic characteristics and the fluorescence emission of the tryptophan residues of the protein were obtained through fluorescence quenching studies at different temperatures. According to the results of the binding constants, the protein's interactions with the Er- complex were moderate, demonstrating that the compound may be transported effectively by the protein. Molecular docking results supported that of the experimental research. The HeLa and MCF-7 cancer cell lines, along with the normal human fibroblast cell line, were used in an MTT assay evaluation of the Er-complex cytotoxicity. The Er-complex displayed a selective inhibitory effect on the proliferation of different cancer cells.
期刊介绍:
The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.