{"title":"通过频率编码和兴奋性进行细胞信息处理","authors":"Alan Givré, Silvina Ponce Dawson","doi":"arxiv-2312.17629","DOIUrl":null,"url":null,"abstract":"Cells continuously interact with their environment and respond to changes\naccordingly. Very often changes in the concentration of extracellular\nsubstances occur which, through receptor binding, give rise to a sequence of\nintracellular changes in what is called a signaling cascade. Increasing\nintensities of the external stimulus can result in increasing concentrations or\nincreasing activation of the internal messengers or can induce a pulsatile\nbehavior of increasing frequency with stimulus strength. This last behavior has\nbeen observed in intracellular Ca$^{2+}$ signals in which Ca$^{2+}$ is released\nfrom the endoplasmic reticulum through Inositol Trisphosphate Receptors\n(IP$_3$Rs), an ubiquitous signaling mechanism involved in many processes of\nphysiological relevance. A statistical analysis of the time intervals between\nsubsequent IP$_3$R-mediated Ca$^{2+}$ pulses observed experimentally has\nrevealed an exponential dependence with the external stimulus strength in\nseveral cell types. This type of dependence, which is reminiscent of Kramers'\nlaw for thermally activated barrier crossing, has also been derived for certain\nexcitable systems. Excitable systems have a stable stationary solution and,\nupon perturbations that surpass a threshold, perform a long excursion in phase\nspace before returning to equilibrium. In this paper we use a very simple\nmathematical model of IP$_3$R-mediated Ca$^{2+}$ signals and published\nexperimental results to derive the scaling law between the interpulse time and\nthe external stimulus strength.","PeriodicalId":501321,"journal":{"name":"arXiv - QuanBio - Cell Behavior","volume":"1 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Cell information processing via frequency encoding and excitability\",\"authors\":\"Alan Givré, Silvina Ponce Dawson\",\"doi\":\"arxiv-2312.17629\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Cells continuously interact with their environment and respond to changes\\naccordingly. Very often changes in the concentration of extracellular\\nsubstances occur which, through receptor binding, give rise to a sequence of\\nintracellular changes in what is called a signaling cascade. Increasing\\nintensities of the external stimulus can result in increasing concentrations or\\nincreasing activation of the internal messengers or can induce a pulsatile\\nbehavior of increasing frequency with stimulus strength. This last behavior has\\nbeen observed in intracellular Ca$^{2+}$ signals in which Ca$^{2+}$ is released\\nfrom the endoplasmic reticulum through Inositol Trisphosphate Receptors\\n(IP$_3$Rs), an ubiquitous signaling mechanism involved in many processes of\\nphysiological relevance. A statistical analysis of the time intervals between\\nsubsequent IP$_3$R-mediated Ca$^{2+}$ pulses observed experimentally has\\nrevealed an exponential dependence with the external stimulus strength in\\nseveral cell types. This type of dependence, which is reminiscent of Kramers'\\nlaw for thermally activated barrier crossing, has also been derived for certain\\nexcitable systems. Excitable systems have a stable stationary solution and,\\nupon perturbations that surpass a threshold, perform a long excursion in phase\\nspace before returning to equilibrium. In this paper we use a very simple\\nmathematical model of IP$_3$R-mediated Ca$^{2+}$ signals and published\\nexperimental results to derive the scaling law between the interpulse time and\\nthe external stimulus strength.\",\"PeriodicalId\":501321,\"journal\":{\"name\":\"arXiv - QuanBio - Cell Behavior\",\"volume\":\"1 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-12-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Cell Behavior\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2312.17629\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Cell Behavior","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2312.17629","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Cell information processing via frequency encoding and excitability
Cells continuously interact with their environment and respond to changes
accordingly. Very often changes in the concentration of extracellular
substances occur which, through receptor binding, give rise to a sequence of
intracellular changes in what is called a signaling cascade. Increasing
intensities of the external stimulus can result in increasing concentrations or
increasing activation of the internal messengers or can induce a pulsatile
behavior of increasing frequency with stimulus strength. This last behavior has
been observed in intracellular Ca$^{2+}$ signals in which Ca$^{2+}$ is released
from the endoplasmic reticulum through Inositol Trisphosphate Receptors
(IP$_3$Rs), an ubiquitous signaling mechanism involved in many processes of
physiological relevance. A statistical analysis of the time intervals between
subsequent IP$_3$R-mediated Ca$^{2+}$ pulses observed experimentally has
revealed an exponential dependence with the external stimulus strength in
several cell types. This type of dependence, which is reminiscent of Kramers'
law for thermally activated barrier crossing, has also been derived for certain
excitable systems. Excitable systems have a stable stationary solution and,
upon perturbations that surpass a threshold, perform a long excursion in phase
space before returning to equilibrium. In this paper we use a very simple
mathematical model of IP$_3$R-mediated Ca$^{2+}$ signals and published
experimental results to derive the scaling law between the interpulse time and
the external stimulus strength.