金属离子在 ATP 合酶的化学催化和构象变化之间的耦合中的作用。

IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Y Hochman, X M Gong, Y Lifshitz, C Carmeli
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引用次数: 0

摘要

通过测量二价金属离子对 ATP 酶特性的影响,利用分离的叶绿体 ATP 合酶(CF0F1)确定了结构-功能关系。与 Ca2+ 离子相比,Mg2+ 离子是更有效的催化剂,其 Kcat/Km 分别为 55.2 和 5.4。与结合有关的其他活性参数,如 MATP 的 Km 和 MADP 的 Ki,在 Mg2+ 存在时结合力更强,Mg2+/Ca2+ 比率分别为 2.8 和 3.8。只有在有 ADP 的情况下才会检测到 Ca2+离子的强结合,其 Kd 为 0.03 +/- 00.6 microM-1,这可能是由于 CaADP 的正交互作用,如抑制特性所示。Mg2+ 离子对其他形式的酶也是更有效的催化剂,如在类木质膜、分离的 CF0F1 和 CF1 中。类木质膜酶、分离的 CF0F1 和可溶性 CF1 的 Kcat/Km 的 Mg2+/Ca2+ 比率分别为 5.3、10.2 和 1.5。这表明,Ca2+ 离子在更完整的整合酶中的催化效率较低,而 Mg2+ 离子在所有形式的酶中的催化效率都一样高。与 Mg2+ 不同,Ca2+ 离子也不支持质子耦合 ATP 合成和 ATP 驱动的质子泵。有人认为,这两种离子配体结构的差异可能是导致其功能不同的原因。Ca2+ 离子八面体第一配位的键长平均比 MgATP 短 0.3 A,这导致 CaATP 的结合力比 MgATP 弱。我们结合过渡态中间体的结合和产物释放速率讨论了不同结合的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Role of metal ions in coupling between chemical catalysis and conformational changes in ATP synthase.

Isolated chloroplast ATP synthase (CF0F1) was used for determination of the structure-function relation by measuring the effect of divalent metal ions on the properties of ATPase. Mg2+ ions were more efficient catalysts than Ca2+ ions as indicated by Kcat/Km of 55.2 and 5.4, respectively. Other activity parameters related to binding, such as the Km of MATP and Ki of MADP, indicated a stronger binding in the presence of Mg2+ as seen from a Mg2+/Ca2+ ratio of 2.8 and 3.8, respectively. Strong binding of Ca2+ ions with a Kd of 0.03 +/- 00.6 microM-1 was detected only in the presence of ADP probably because of the positive interactive effect of CaADP as indicated in the inhibition properties. Mg2+ ions were more efficient catalysts also in other forms of the enzyme such as in the thylakoid membrane, in isolated CF0F1 and in CF1. The Mg2+/Ca2+ ratio of Kcat/Km was 5.3, 10.2 and 1.5 for the thylakoid membrane enzyme, the isolated CF0F1 and the soluble CF1 respectively. This indicated that Ca2+ ions became less efficient catalysts in the more intact and integrated enzyme while Mg2+ ions were as efficient in all forms of the enzyme. Unlike Mg2+, Ca2+ ions also did not support proton-coupled ATP synthesis and ATP driven proton pumping. It is suggested that the differences in the ligand structure of these two ions might be the reason for the differential function. An average 0.3 A shorter bond length of octahedral first coordination in Ca2+ ions caused a weaker binding of CaATP than that of MgATP. The effect of differential binding is discussed in relation to the binding of the transition state intermediate and to the rate of product release.

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来源期刊
Indian journal of biochemistry & biophysics
Indian journal of biochemistry & biophysics 生物-生化与分子生物学
CiteScore
2.90
自引率
50.00%
发文量
88
审稿时长
3 months
期刊介绍: Started in 1964, this journal publishes original research articles in the following areas: structure-function relationships of biomolecules; biomolecular recognition, protein-protein and protein-DNA interactions; gene-cloning, genetic engineering, genome analysis, gene targeting, gene expression, vectors, gene therapy; drug targeting, drug design; molecular basis of genetic diseases; conformational studies, computer simulation, novel DNA structures and their biological implications, protein folding; enzymes structure, catalytic mechanisms, regulation; membrane biochemistry, transport, ion channels, signal transduction, cell-cell communication, glycobiology; receptors, antigen-antibody binding, neurochemistry, ageing, apoptosis, cell cycle control; hormones, growth factors; oncogenes, host-virus interactions, viral assembly and structure; intermediary metabolism, molecular basis of disease processes, vitamins, coenzymes, carrier proteins, toxicology; plant and microbial biochemistry; surface forces, micelles and microemulsions, colloids, electrical phenomena, etc. in biological systems. Solicited peer reviewed articles on contemporary Themes and Methods in Biochemistry and Biophysics form an important feature of IJBB. Review articles on a current topic in the above fields are also considered. They must dwell more on research work done during the last couple of years in the field and authors should integrate their own work with that of others with acumen and authenticity, mere compilation of references by a third party is discouraged. While IJBB strongly promotes innovative novel research works for publication as full length papers, it also considers research data emanating from limited objectives, and extension of ongoing experimental works as ‘Notes’. IJBB follows “Double Blind Review process” where author names, affiliations and other correspondence details are removed to ensure fare evaluation. At the same time, reviewer names are not disclosed to authors.
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