Linke He , Yulong Fu , Shaoyi Hou , Guoqiang Wang , Jiabao Zhao , Yipeng Xing , Shuhua Li , Jing Ma
{"title":"特定于反应条件和官能团的知识发现:基于数据和计算的有机硼无过渡金属转化分析","authors":"Linke He , Yulong Fu , Shaoyi Hou , Guoqiang Wang , Jiabao Zhao , Yipeng Xing , Shuhua Li , Jing Ma","doi":"10.1016/j.aichem.2023.100034","DOIUrl":null,"url":null,"abstract":"<div><p>Gaining insights into overarching trends in chemical reaction systems is crucial for refining reaction conditions and developing novel reactions. These knowledgements include preferences for certain reagents, solvents, and functional group tolerance rules. Traditionally, synthetic chemists have relied on extensive literature searching to acquire the knowledge, a process that is both time-consuming and laborious. To streamline this process, we construct a standardized dataset and knowledge graph on an emerging domain, transition-metal-free transformations with organoborons. The dataset, compiled from organic reaction literature, includes comprehensive details of reaction scopes and conditions. The subsequent construction of a knowledge graph offers a visual representation of the reactions and their interrelationships. Through knowledge graph-based hierarchical analysis and density functional theory (DFT) calculations, we revealed the currently most frequently used reactants, synthetic conditions, and functional group rules in this field. We anticipate this knowledge graph-based approach will accelerate the acquisition and transfer of chemical reaction knowledge, catalyzing the discovery of new reactions. This work provides an automatic and adaptive framework for extracting key insights from reaction datasets to inform the design of novel reactions.</p></div>","PeriodicalId":72302,"journal":{"name":"Artificial intelligence chemistry","volume":"2 1","pages":"Article 100034"},"PeriodicalIF":0.0000,"publicationDate":"2023-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2949747723000349/pdfft?md5=c4bedd7068acf7555c4e457d139943df&pid=1-s2.0-S2949747723000349-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Reaction condition- and functional group-specific knowledge discovery: Data- and computation-based analysis on transition-metal-free transformation of organoborons\",\"authors\":\"Linke He , Yulong Fu , Shaoyi Hou , Guoqiang Wang , Jiabao Zhao , Yipeng Xing , Shuhua Li , Jing Ma\",\"doi\":\"10.1016/j.aichem.2023.100034\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Gaining insights into overarching trends in chemical reaction systems is crucial for refining reaction conditions and developing novel reactions. These knowledgements include preferences for certain reagents, solvents, and functional group tolerance rules. Traditionally, synthetic chemists have relied on extensive literature searching to acquire the knowledge, a process that is both time-consuming and laborious. To streamline this process, we construct a standardized dataset and knowledge graph on an emerging domain, transition-metal-free transformations with organoborons. The dataset, compiled from organic reaction literature, includes comprehensive details of reaction scopes and conditions. The subsequent construction of a knowledge graph offers a visual representation of the reactions and their interrelationships. Through knowledge graph-based hierarchical analysis and density functional theory (DFT) calculations, we revealed the currently most frequently used reactants, synthetic conditions, and functional group rules in this field. We anticipate this knowledge graph-based approach will accelerate the acquisition and transfer of chemical reaction knowledge, catalyzing the discovery of new reactions. This work provides an automatic and adaptive framework for extracting key insights from reaction datasets to inform the design of novel reactions.</p></div>\",\"PeriodicalId\":72302,\"journal\":{\"name\":\"Artificial intelligence chemistry\",\"volume\":\"2 1\",\"pages\":\"Article 100034\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-12-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2949747723000349/pdfft?md5=c4bedd7068acf7555c4e457d139943df&pid=1-s2.0-S2949747723000349-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Artificial intelligence chemistry\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2949747723000349\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Artificial intelligence chemistry","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2949747723000349","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Reaction condition- and functional group-specific knowledge discovery: Data- and computation-based analysis on transition-metal-free transformation of organoborons
Gaining insights into overarching trends in chemical reaction systems is crucial for refining reaction conditions and developing novel reactions. These knowledgements include preferences for certain reagents, solvents, and functional group tolerance rules. Traditionally, synthetic chemists have relied on extensive literature searching to acquire the knowledge, a process that is both time-consuming and laborious. To streamline this process, we construct a standardized dataset and knowledge graph on an emerging domain, transition-metal-free transformations with organoborons. The dataset, compiled from organic reaction literature, includes comprehensive details of reaction scopes and conditions. The subsequent construction of a knowledge graph offers a visual representation of the reactions and their interrelationships. Through knowledge graph-based hierarchical analysis and density functional theory (DFT) calculations, we revealed the currently most frequently used reactants, synthetic conditions, and functional group rules in this field. We anticipate this knowledge graph-based approach will accelerate the acquisition and transfer of chemical reaction knowledge, catalyzing the discovery of new reactions. This work provides an automatic and adaptive framework for extracting key insights from reaction datasets to inform the design of novel reactions.