Meagan S. Oakley, Madaline R. Oakes, Brian D. Wagner, Jason K. Pearson
{"title":"揭示通过包合作用选择性稳定高能非对映异构体的机制","authors":"Meagan S. Oakley, Madaline R. Oakes, Brian D. Wagner, Jason K. Pearson","doi":"10.1007/s00214-023-03077-7","DOIUrl":null,"url":null,"abstract":"<p>Supramolecular systems may be used to stabilize otherwise unstable isomers to find alternative synthetic pathways. It has been reported that cucurbit[8]uril can stabilize <i>trans</i>-I and <i>trans</i>-II Cu<span>\\(^{{\\textrm{II}}}\\)</span> cyclam, whereas <i>trans</i>-III is the only non-substituted <i>trans</i> Cu<span>\\(^{{\\textrm{II}}}\\)</span> cyclam diastereoisomer found outside of the host molecule experimentally. Quantum chemistry methods can provide valuable insight into the intermolecular interactions involved in these inclusion complexes. All five possible <i>trans</i> diastereoisomers of Cu<span>\\(^{{\\textrm{II}}}\\)</span> cyclam were studied within the host molecule to calculate the interaction energy and free energy of association for each complex. The relative free energies of the five free cyclams confirm that <i>trans</i>-I and <i>trans</i>-II are the most energetically accessible diastereoisomers from the initial <i>trans</i>-III starting point. Energy decomposition analysis was used to identify the attractive and repulsive interactions between cyclam and cucurbit[8]uril and showed that <i>trans</i>-II encounters repulsive forces almost three times greater than <i>trans</i>-I, which may explain the 7:3 ratio of <i>trans</i>-I to <i>trans</i>-II within cucurbit[8]uril that occurs experimentally. Optimized complex geometries with <i>trans</i>-III, IV, and V show that the cyclams protrude out of cucurbit[8]uril, whereas <i>trans</i>-I and <i>trans</i>-II become more encapsulated and elongate the host, suggesting that the position of the cyclam is extremely important when forming non-covalent interactions. Our results agree with the experimental findings and provide greater insight into why the most stable isolated cyclam diastereoisomer, <i>trans</i>-III, does not form a complex.</p>","PeriodicalId":23045,"journal":{"name":"Theoretical Chemistry Accounts","volume":"31 1","pages":""},"PeriodicalIF":1.6000,"publicationDate":"2023-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Uncovering the mechanism of selective stabilization of high-energy diastereoisomers via inclusion\",\"authors\":\"Meagan S. Oakley, Madaline R. Oakes, Brian D. Wagner, Jason K. Pearson\",\"doi\":\"10.1007/s00214-023-03077-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Supramolecular systems may be used to stabilize otherwise unstable isomers to find alternative synthetic pathways. It has been reported that cucurbit[8]uril can stabilize <i>trans</i>-I and <i>trans</i>-II Cu<span>\\\\(^{{\\\\textrm{II}}}\\\\)</span> cyclam, whereas <i>trans</i>-III is the only non-substituted <i>trans</i> Cu<span>\\\\(^{{\\\\textrm{II}}}\\\\)</span> cyclam diastereoisomer found outside of the host molecule experimentally. Quantum chemistry methods can provide valuable insight into the intermolecular interactions involved in these inclusion complexes. All five possible <i>trans</i> diastereoisomers of Cu<span>\\\\(^{{\\\\textrm{II}}}\\\\)</span> cyclam were studied within the host molecule to calculate the interaction energy and free energy of association for each complex. The relative free energies of the five free cyclams confirm that <i>trans</i>-I and <i>trans</i>-II are the most energetically accessible diastereoisomers from the initial <i>trans</i>-III starting point. Energy decomposition analysis was used to identify the attractive and repulsive interactions between cyclam and cucurbit[8]uril and showed that <i>trans</i>-II encounters repulsive forces almost three times greater than <i>trans</i>-I, which may explain the 7:3 ratio of <i>trans</i>-I to <i>trans</i>-II within cucurbit[8]uril that occurs experimentally. Optimized complex geometries with <i>trans</i>-III, IV, and V show that the cyclams protrude out of cucurbit[8]uril, whereas <i>trans</i>-I and <i>trans</i>-II become more encapsulated and elongate the host, suggesting that the position of the cyclam is extremely important when forming non-covalent interactions. Our results agree with the experimental findings and provide greater insight into why the most stable isolated cyclam diastereoisomer, <i>trans</i>-III, does not form a complex.</p>\",\"PeriodicalId\":23045,\"journal\":{\"name\":\"Theoretical Chemistry Accounts\",\"volume\":\"31 1\",\"pages\":\"\"},\"PeriodicalIF\":1.6000,\"publicationDate\":\"2023-12-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Theoretical Chemistry Accounts\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1007/s00214-023-03077-7\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Theoretical Chemistry Accounts","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1007/s00214-023-03077-7","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Uncovering the mechanism of selective stabilization of high-energy diastereoisomers via inclusion
Supramolecular systems may be used to stabilize otherwise unstable isomers to find alternative synthetic pathways. It has been reported that cucurbit[8]uril can stabilize trans-I and trans-II Cu\(^{{\textrm{II}}}\) cyclam, whereas trans-III is the only non-substituted trans Cu\(^{{\textrm{II}}}\) cyclam diastereoisomer found outside of the host molecule experimentally. Quantum chemistry methods can provide valuable insight into the intermolecular interactions involved in these inclusion complexes. All five possible trans diastereoisomers of Cu\(^{{\textrm{II}}}\) cyclam were studied within the host molecule to calculate the interaction energy and free energy of association for each complex. The relative free energies of the five free cyclams confirm that trans-I and trans-II are the most energetically accessible diastereoisomers from the initial trans-III starting point. Energy decomposition analysis was used to identify the attractive and repulsive interactions between cyclam and cucurbit[8]uril and showed that trans-II encounters repulsive forces almost three times greater than trans-I, which may explain the 7:3 ratio of trans-I to trans-II within cucurbit[8]uril that occurs experimentally. Optimized complex geometries with trans-III, IV, and V show that the cyclams protrude out of cucurbit[8]uril, whereas trans-I and trans-II become more encapsulated and elongate the host, suggesting that the position of the cyclam is extremely important when forming non-covalent interactions. Our results agree with the experimental findings and provide greater insight into why the most stable isolated cyclam diastereoisomer, trans-III, does not form a complex.
期刊介绍:
TCA publishes papers in all fields of theoretical chemistry, computational chemistry, and modeling. Fundamental studies as well as applications are included in the scope. In many cases, theorists and computational chemists have special concerns which reach either across the vertical borders of the special disciplines in chemistry or else across the horizontal borders of structure, spectra, synthesis, and dynamics. TCA is especially interested in papers that impact upon multiple chemical disciplines.