Deokjea Cha, Jin-Young Kim, Kang-San Kim, Young-Joong Kim
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引用次数: 0
摘要
韩国野鸭(Koreanohadra koreana)是被列为濒危物种的韩国特有物种。虽然对韩国金龟的生态学和系统发育进行了研究,但其与近缘种Koreanohadra kurodana (K. kurodana)在形态上的相似性给物种鉴定带来了困难。此外,这也导致了在确定保护韩国虎的基本栖息地信息时的混乱。为了绕过这个问题,我们开发了一种非侵入性的物种识别方法,可以从基因上区分它们。虽然已经有各种利用软体动物黏液的非侵入性基因组DNA (gDNA)提取方法,但由于需要对目标物种进行物理定位,这些方法受到限制。为了解决这一问题,本研究建立了一种从蜗牛粪便中提取基因dna的方法。该方法利用一组引物扩增了韩国田螺的细胞色素b片段,但没有扩增黑田螺或其他陆地蜗牛的细胞色素b片段。因此,如果在排泄后5天内收集陆生蜗牛的粪便,可用于获得基因可用水平的gDNA。这种利用粪便的非侵入性物种识别方法将有助于促进基因研究,而不会伤害濒危物种,如果目标物种不在栖息地。此外,利用它们的栖息地信息来帮助采取必要的保护措施,或许可以进一步区分韩国黑田鼠和韩国黑田鼠。
Species identification method by a new non-invasive technique in Korean endangered terrestrial snail, Koreanohadra Koreana (Gastropoda: Mollusca)
Koreanohadra koreana (K. koreana) is an endemic species in South Korea that is listed as endangered. While the ecology and phylogenetics of K. koreana have been studied, its morphological similarity to the related species Koreanohadra kurodana (K. kurodana), can make species identification difficult. Furthermore, this has led to confusion when determining essential habitat information for the conservation of K. koreana. To bypass this issue, we have developed a non-invasive species identification method that can genetically differentiate between them. While there are already various non-invasive genomic DNA (gDNA) extraction methods that utilize the mucus from mollusks, they are limited as they require the target species to be physically located. To address this, in this investigation a method of extracting gDNA from the feces of snails was developed. The method utilized a primer set to amplify a cytochrome b fragment from K. koreana but not K. kurodana or other terrestrial snails. The feces of terrestrial snails could thus be used to obtain gDNA to a genetically usable level if collected within 5 days of excretion. This non-invasive species identification method using feces will help to facilitate genetic research without harming the endangered species and if the target species is not physically in the habitat. Moreover, K. koreana and K. kurodana could perhaps be further distinguished, using their habitat information to help facilitate essential conservation measures.