{"title":"低维细胞形状空间的坐标区分了单个静态细胞图像的动态迁移","authors":"Xiuxiu He, Kuangcai Chen, Ning Fang, Yi Jiang","doi":"arxiv-2309.16498","DOIUrl":null,"url":null,"abstract":"Cell shape has long been used to discern cell phenotypes and states, but the\nunderlying premise has not been quantitatively tested. Here, we show that a\nsingle cell image can be used to discriminate its migration behavior by\nanalyzing a large number of cell migration data in vitro. We analyzed a large\nnumber of two-dimensional cell migration images over time and found that the\ncell shape variation space has only six dimensions, and migration behavior can\nbe determined by the coordinates of a single cell image in this 6-dimensional\nshape-space. We further show that this is possible because persistent cell\nmigration is characterized by spatial-temporally coordinated protrusion and\ncontraction, and a distribution signature in the shape-space. Our findings\nprovide a quantitative underpinning for using cell morphology to differentiate\ncell dynamical behavior.","PeriodicalId":501321,"journal":{"name":"arXiv - QuanBio - Cell Behavior","volume":"96 ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images\",\"authors\":\"Xiuxiu He, Kuangcai Chen, Ning Fang, Yi Jiang\",\"doi\":\"arxiv-2309.16498\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Cell shape has long been used to discern cell phenotypes and states, but the\\nunderlying premise has not been quantitatively tested. Here, we show that a\\nsingle cell image can be used to discriminate its migration behavior by\\nanalyzing a large number of cell migration data in vitro. We analyzed a large\\nnumber of two-dimensional cell migration images over time and found that the\\ncell shape variation space has only six dimensions, and migration behavior can\\nbe determined by the coordinates of a single cell image in this 6-dimensional\\nshape-space. We further show that this is possible because persistent cell\\nmigration is characterized by spatial-temporally coordinated protrusion and\\ncontraction, and a distribution signature in the shape-space. Our findings\\nprovide a quantitative underpinning for using cell morphology to differentiate\\ncell dynamical behavior.\",\"PeriodicalId\":501321,\"journal\":{\"name\":\"arXiv - QuanBio - Cell Behavior\",\"volume\":\"96 \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-09-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Cell Behavior\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2309.16498\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Cell Behavior","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2309.16498","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images
Cell shape has long been used to discern cell phenotypes and states, but the
underlying premise has not been quantitatively tested. Here, we show that a
single cell image can be used to discriminate its migration behavior by
analyzing a large number of cell migration data in vitro. We analyzed a large
number of two-dimensional cell migration images over time and found that the
cell shape variation space has only six dimensions, and migration behavior can
be determined by the coordinates of a single cell image in this 6-dimensional
shape-space. We further show that this is possible because persistent cell
migration is characterized by spatial-temporally coordinated protrusion and
contraction, and a distribution signature in the shape-space. Our findings
provide a quantitative underpinning for using cell morphology to differentiate
cell dynamical behavior.