{"title":"利用排队理论绘制随机基因表达模型的图景","authors":"Juraj Szavits-Nossan, Ramon Grima","doi":"arxiv-2307.03253","DOIUrl":null,"url":null,"abstract":"Stochastic models of gene expression are typically formulated using the\nchemical master equation, which can be solved exactly or approximately using a\nrepertoire of analytical methods. Here, we provide a tutorial review of an\nalternative approach based on queuing theory that has rarely been used in the\nliterature of gene expression. We discuss the interpretation of six types of\ninfinite server queues from the angle of stochastic single-cell biology and\nprovide analytical expressions for the stationary and non-stationary\ndistributions and/or moments of mRNA/protein numbers, and bounds on the Fano\nfactor. This approach may enable the solution of complex models which have\nhitherto evaded analytical solution.","PeriodicalId":501170,"journal":{"name":"arXiv - QuanBio - Subcellular Processes","volume":"58 31","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Charting the landscape of stochastic gene expression models using queueing theory\",\"authors\":\"Juraj Szavits-Nossan, Ramon Grima\",\"doi\":\"arxiv-2307.03253\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Stochastic models of gene expression are typically formulated using the\\nchemical master equation, which can be solved exactly or approximately using a\\nrepertoire of analytical methods. Here, we provide a tutorial review of an\\nalternative approach based on queuing theory that has rarely been used in the\\nliterature of gene expression. We discuss the interpretation of six types of\\ninfinite server queues from the angle of stochastic single-cell biology and\\nprovide analytical expressions for the stationary and non-stationary\\ndistributions and/or moments of mRNA/protein numbers, and bounds on the Fano\\nfactor. This approach may enable the solution of complex models which have\\nhitherto evaded analytical solution.\",\"PeriodicalId\":501170,\"journal\":{\"name\":\"arXiv - QuanBio - Subcellular Processes\",\"volume\":\"58 31\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-07-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Subcellular Processes\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2307.03253\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Subcellular Processes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2307.03253","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Charting the landscape of stochastic gene expression models using queueing theory
Stochastic models of gene expression are typically formulated using the
chemical master equation, which can be solved exactly or approximately using a
repertoire of analytical methods. Here, we provide a tutorial review of an
alternative approach based on queuing theory that has rarely been used in the
literature of gene expression. We discuss the interpretation of six types of
infinite server queues from the angle of stochastic single-cell biology and
provide analytical expressions for the stationary and non-stationary
distributions and/or moments of mRNA/protein numbers, and bounds on the Fano
factor. This approach may enable the solution of complex models which have
hitherto evaded analytical solution.