非平衡簇-锚点存在时的簇聚集

Renaud Baillou, Jonas Ranft
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引用次数: 0

摘要

非平衡簇-在细胞膜内或细胞膜上扩散的颗粒簇聚集被假设为导致有限大小的生物环境域,如脂筏,细胞粘附复合物,或神经元突触后域。在这种情况下,颗粒的解吸平衡了通往膜的连续通量,对可能的聚集体大小施加了限制,并产生了固定的尺寸分布。在这里,我们研究了二维非平衡簇簇聚集的情况,其中扩散的粒子和/或簇在特定的锚定位置保持固定在空间中,这应该与突触特别相关,但也可能存在于其他生物或物理系统中。利用锚点周围浓度场的有效平均场描述,我们推导出它们的平均大小作为锚点密度等参数的函数的表达式。我们进一步提出并求解了适当的速率方程,使我们能够预测扩散簇和固定簇的大小分布。我们用基于粒子的模拟证实了我们的结果,并讨论了对生物和物理系统的潜在影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Non-equilibrium cluster-cluster aggregation in the presence of anchoring sites
Non-equilibrium cluster-cluster aggregation of particles diffusing in or at the cell membrane has been hypothesized to lead to domains of finite size in different biological contexts such as lipid rafts, cell adhesion complexes, or postsynaptic domains in neurons. In this scenario, the desorption of particles balances a continuous flux to the membrane, imposing a cut-off on possible aggregate sizes and giving rise to a stationary size distribution. Here, we investigate the case of non-equilibrium cluster-cluster aggregation in two dimensions where diffusing particles and/or clusters remain fixed in space at specific anchoring sites, which should be particularly relevant for synapses but may also be present in other biological or physical systems. Using an effective mean-field description of the concentration field around anchored clusters, we derive an expression for their average size as a function of parameters such as the anchoring site density. We furthermore propose and solve appropriate rate equations that allow us to predict the size distributions of both diffusing and fixed clusters. We confirm our results with particle-based simulations, and discuss potential implications for biological and physical systems.
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