一个基于样条的框架,用于连续观察多状态生存过程的灵活建模

IF 1.2 4区 数学 Q2 STATISTICS & PROBABILITY
Alessia Eletti, Giampiero Marra, Rosalba Radice
{"title":"一个基于样条的框架,用于连续观察多状态生存过程的灵活建模","authors":"Alessia Eletti, Giampiero Marra, Rosalba Radice","doi":"10.1177/1471082x231176120","DOIUrl":null,"url":null,"abstract":"Multistate modelling is becoming increasingly popular due to the availability of richer longitudinal health data. When the times at which the events characterising disease progression are known, the modelling of the multistate process is greatly simplified as it can be broken down in a number of traditional survival models. We propose to flexibly model them through the existing general link-based additive framework implemented in the R package GJRM. The associated transition probabilities can then be obtained through a simulation-based approach implemented in the R package mstate, which is appealing due to its generality. The integration between the two is seamless and efficient since we model a transformation of the survival function, rather than the hazard function, as is commonly found. This is achieved through the use of shape constrained P-splines which elegantly embed the monotonicity required for the survival functions within the construction of the survival functions themselves. The proposed framework allows for the inclusion of virtually any type of covariate effects, including time-dependent ones, while imposing no restriction on the multistate process assumed. We exemplify the usage of this framework through a case study on breast cancer patients.","PeriodicalId":49476,"journal":{"name":"Statistical Modelling","volume":"90 1","pages":"0"},"PeriodicalIF":1.2000,"publicationDate":"2023-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A spline-based framework for the flexible modelling of continuously observed multistate survival processes\",\"authors\":\"Alessia Eletti, Giampiero Marra, Rosalba Radice\",\"doi\":\"10.1177/1471082x231176120\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Multistate modelling is becoming increasingly popular due to the availability of richer longitudinal health data. When the times at which the events characterising disease progression are known, the modelling of the multistate process is greatly simplified as it can be broken down in a number of traditional survival models. We propose to flexibly model them through the existing general link-based additive framework implemented in the R package GJRM. The associated transition probabilities can then be obtained through a simulation-based approach implemented in the R package mstate, which is appealing due to its generality. The integration between the two is seamless and efficient since we model a transformation of the survival function, rather than the hazard function, as is commonly found. This is achieved through the use of shape constrained P-splines which elegantly embed the monotonicity required for the survival functions within the construction of the survival functions themselves. The proposed framework allows for the inclusion of virtually any type of covariate effects, including time-dependent ones, while imposing no restriction on the multistate process assumed. We exemplify the usage of this framework through a case study on breast cancer patients.\",\"PeriodicalId\":49476,\"journal\":{\"name\":\"Statistical Modelling\",\"volume\":\"90 1\",\"pages\":\"0\"},\"PeriodicalIF\":1.2000,\"publicationDate\":\"2023-09-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Statistical Modelling\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1177/1471082x231176120\",\"RegionNum\":4,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"STATISTICS & PROBABILITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Statistical Modelling","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1177/1471082x231176120","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"STATISTICS & PROBABILITY","Score":null,"Total":0}
引用次数: 0

摘要

由于可以获得更丰富的纵向健康数据,多状态建模正变得越来越流行。当表征疾病进展的事件的时间已知时,多状态过程的建模就大大简化了,因为它可以分解为许多传统的生存模型。我们建议通过在R包GJRM中实现的现有通用的基于链接的添加框架来灵活地建模它们。然后可以通过在R包状态中实现的基于模拟的方法获得相关的转移概率,由于其通用性,该方法很有吸引力。两者之间的整合是无缝且有效的,因为我们建模的是生存函数的转换,而不是通常发现的风险函数。这是通过使用形状约束的p样条来实现的,它在生存函数本身的构造中优雅地嵌入了生存函数所需的单调性。所提出的框架允许包含几乎任何类型的协变量效应,包括时间相关效应,同时对假设的多状态过程没有限制。我们通过对乳腺癌患者的案例研究来举例说明这一框架的使用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A spline-based framework for the flexible modelling of continuously observed multistate survival processes
Multistate modelling is becoming increasingly popular due to the availability of richer longitudinal health data. When the times at which the events characterising disease progression are known, the modelling of the multistate process is greatly simplified as it can be broken down in a number of traditional survival models. We propose to flexibly model them through the existing general link-based additive framework implemented in the R package GJRM. The associated transition probabilities can then be obtained through a simulation-based approach implemented in the R package mstate, which is appealing due to its generality. The integration between the two is seamless and efficient since we model a transformation of the survival function, rather than the hazard function, as is commonly found. This is achieved through the use of shape constrained P-splines which elegantly embed the monotonicity required for the survival functions within the construction of the survival functions themselves. The proposed framework allows for the inclusion of virtually any type of covariate effects, including time-dependent ones, while imposing no restriction on the multistate process assumed. We exemplify the usage of this framework through a case study on breast cancer patients.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Statistical Modelling
Statistical Modelling 数学-统计学与概率论
CiteScore
2.20
自引率
0.00%
发文量
16
审稿时长
>12 weeks
期刊介绍: The primary aim of the journal is to publish original and high-quality articles that recognize statistical modelling as the general framework for the application of statistical ideas. Submissions must reflect important developments, extensions, and applications in statistical modelling. The journal also encourages submissions that describe scientifically interesting, complex or novel statistical modelling aspects from a wide diversity of disciplines, and submissions that embrace the diversity of applied statistical modelling.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信