用混合信号机制模拟极性驱动的双层组织层流模式

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Joshua W. Moore, Trevor C. Dale, Thomas E. Woolley
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引用次数: 0

摘要

高分辨率实验方法的最新进展突出了细胞信号通路串扰和局部信号活动在许多生物系统的发育和疾病中的重要性。对多种信号通路的研究通常会引入不同的细胞-细胞通信方法,即基于接触的或弥漫性信号,这对细胞行为产生了空间和时间上的依赖。受双层组织发育过程中控制细胞命运决定的细胞机制的启发,我们使用动力系统结合多层图来分析信号极性和通路串扰在蛋白质活性的细颗粒模式形成中的作用。具体而言,我们研究了多层图边缘结构和权重如何影响腺体组织中常见的双层结构中细胞的分层(层流)模式。给出了大尺度空间离散动力系统中齐次元态存在、唯一性和不稳定性的充分条件。利用图形划分的模式模板方法生成商系统,结合单调动力系统的概念,我们利用广泛的降维为诱导具有多个空间依赖的胞内成分的细颗粒层流模式所需的极性提供了存在条件。然后,我们探索商和大规模动力系统之间的频谱联系,以扩展层流模式标准,从存在到收敛,在大规模动力系统中足够大的细胞极性,独立于组织中的空间维度和细胞数量。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Modeling Polarity-Driven Laminar Patterns in Bilayer Tissues with Mixed Signaling Mechanisms
Recent advances in high-resolution experimental methods have highlighted the significance of cell signal pathway crosstalk and localized signaling activity in the development and disease of numerous biological systems. The investigation of multiple signal pathways often introduces different methods of cell-cell communication, i.e., contact-based or diffusive signaling, which generates both a spatial and a temporal dependence on cell behaviors. Motivated by cellular mechanisms that control cell-fate decisions in developing bilayer tissues, we use dynamical systems coupled with multilayer graphs to analyze the role of signaling polarity and pathway crosstalk in fine-grain pattern formation of protein activity. Specifically, we study how multilayer graph edge structures and weights influence the layerwise (laminar) patterning of cells in bilayer structures, which are commonly found in glandular tissues. We present sufficient conditions for the existence, uniqueness, and instability of homogeneous cell states in the large-scale spatially discrete dynamical system. Using methods of pattern templating by graph partitioning to generate quotient systems, in combination with concepts from monotone dynamical systems, we exploit the extensive dimensionality reduction to provide existence conditions for the polarity required to induce fine-grain laminar patterns with multiple spatially dependent intracellular components. We then explore the spectral links between the quotient and large-scale dynamical systems to extend the laminar patterning criteria from existence to convergence for sufficiently large amounts of cellular polarity in the large-scale dynamical system, independent of spatial dimension and number of cells in the tissue.
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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