一种新的基于Shannon熵的分离指标及分类技术

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Jorge Navarro, Francesco Buono, Jorge M. Arevalillo
{"title":"一种新的基于Shannon熵的分离指标及分类技术","authors":"Jorge Navarro, Francesco Buono, Jorge M. Arevalillo","doi":"10.1007/s11009-023-10055-w","DOIUrl":null,"url":null,"abstract":"Abstract The purpose is to use Shannon entropy measures to develop classification techniques and an index which estimates the separation of the groups in a finite mixture model. These measures can be applied to machine learning techniques such as discriminant analysis, cluster analysis, exploratory data analysis, etc. If we know the number of groups and we have training samples from each group (supervised learning) the index is used to measure the separation of the groups. Here some entropy measures are used to classify new individuals in one of these groups. If we are not sure about the number of groups (unsupervised learning), the index can be used to determine the optimal number of groups from an entropy (information/uncertainty) criterion. It can also be used to determine the best variables in order to separate the groups. In all the cases we assume that we have absolutely continuous random variables and we use the Shannon entropy based on the probability density function. Theoretical, parametric and non-parametric techniques are proposed to get approximations of these entropy measures in practice. An application to gene selection in a colon cancer discrimination study with a lot of variables is provided as well.","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2023-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A New Separation Index and Classification Techniques Based on Shannon Entropy\",\"authors\":\"Jorge Navarro, Francesco Buono, Jorge M. Arevalillo\",\"doi\":\"10.1007/s11009-023-10055-w\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract The purpose is to use Shannon entropy measures to develop classification techniques and an index which estimates the separation of the groups in a finite mixture model. These measures can be applied to machine learning techniques such as discriminant analysis, cluster analysis, exploratory data analysis, etc. If we know the number of groups and we have training samples from each group (supervised learning) the index is used to measure the separation of the groups. Here some entropy measures are used to classify new individuals in one of these groups. If we are not sure about the number of groups (unsupervised learning), the index can be used to determine the optimal number of groups from an entropy (information/uncertainty) criterion. It can also be used to determine the best variables in order to separate the groups. In all the cases we assume that we have absolutely continuous random variables and we use the Shannon entropy based on the probability density function. Theoretical, parametric and non-parametric techniques are proposed to get approximations of these entropy measures in practice. An application to gene selection in a colon cancer discrimination study with a lot of variables is provided as well.\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2023-09-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s11009-023-10055-w\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s11009-023-10055-w","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

摘要目的是利用香农熵测度来发展分类技术和估计有限混合模型中群体分离的指标。这些度量可以应用于机器学习技术,如判别分析、聚类分析、探索性数据分析等。如果我们知道组的数量,并且我们有来自每个组的训练样本(监督学习),则该指标用于度量组的分离。这里使用一些熵度量来对这些组中的新个体进行分类。如果我们不确定组的数量(无监督学习),该指标可用于从熵(信息/不确定性)标准确定最优组的数量。它还可以用于确定最佳变量,以便将组分开。在所有情况下,我们假设我们有绝对连续的随机变量,我们使用基于概率密度函数的香农熵。在实践中,提出了理论、参数和非参数技术来获得这些熵测度的近似。本文还提供了一种在具有大量变量的结肠癌鉴别研究中进行基因选择的应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A New Separation Index and Classification Techniques Based on Shannon Entropy

A New Separation Index and Classification Techniques Based on Shannon Entropy
Abstract The purpose is to use Shannon entropy measures to develop classification techniques and an index which estimates the separation of the groups in a finite mixture model. These measures can be applied to machine learning techniques such as discriminant analysis, cluster analysis, exploratory data analysis, etc. If we know the number of groups and we have training samples from each group (supervised learning) the index is used to measure the separation of the groups. Here some entropy measures are used to classify new individuals in one of these groups. If we are not sure about the number of groups (unsupervised learning), the index can be used to determine the optimal number of groups from an entropy (information/uncertainty) criterion. It can also be used to determine the best variables in order to separate the groups. In all the cases we assume that we have absolutely continuous random variables and we use the Shannon entropy based on the probability density function. Theoretical, parametric and non-parametric techniques are proposed to get approximations of these entropy measures in practice. An application to gene selection in a colon cancer discrimination study with a lot of variables is provided as well.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信