来自三氯乙烯污染土壤的乙炔营养和重氮营养缓生根瘤菌菌株I71

Denise Akob, John Sutton, Timothy Bushman, Shaun Baesman, Edina Klein, Yesha Shrestha, Robert Andrews, Janna Fierst, Max Kolton, Sara Gushgari-Doyle, Ronald Oremland, John Freeman
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摘要

乙炔(c2h 2)是地球现代大气中的微量成分,被乙炔营养微生物用作其唯一的碳和能量来源(Akob et al. 2018)。乙炔营养微生物通过乙炔水合酶催化的反应水合乙炔,乙炔水合酶是一种异质酶。截至2018年,已知有15种乙酰营养菌,包括与放线菌门相关的好氧菌,以及与脱硫菌门相关的厚壁菌门和厌氧菌。然而,我们假设自然界中存在未知的乙酰氨基营养体多样性。我们最近通过从三氯乙烯(TCE)污染的土壤中分离出需氧乙酰营养菌,缓生根瘤菌菌株I71,扩大了已知的乙酰营养菌分布(Akob et al. 2022)。菌株I71是α变形菌纲的一员,这是在变形菌门中首次观察到需氧乙酰营养菌。分离物通过异养和乙酰营养代谢生长,重氮营养,能够固定氮。乙酰化和固氮是已知仅有的两种转化乙炔的酶促反应,这是已知的第二种同时进行这两种反应的分离物(Akob et al. 2017, Baesman et al. 2019)。缓生根瘤菌成员通过提供生物可利用氮来改善植物健康和提高作物产量的能力得到了很好的研究。基于基因组、培养和蛋白质预测分析,消耗乙炔的能力在慢生根瘤菌属中可能并不普遍。这些发现表明,菌株I71的表型能力可能是独特的,并使其在污染物生物降解和养分循环等研究途径中成为进一步研究的良好候选者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Acetylenotrophic and Diazotrophic Bradyrhizobium sp. Strain I71 from Trichloroethylene-Contaminated Soils
Acetylene (C 2 H 2 ) is a trace constituent of Earth’s modern atmosphere and is used by acetylenotrophic microorganisms as their sole carbon and energy source (Akob et al. 2018) Acetylenotrophs hydrate acetylene through a reaction catalyzed by acetylene hydratase, which is a heterogeneous class of enzymes. As of 2018, there were 15 known strains of acetylenotrophs including aerobic species affiliated with the Actinobacteria, and Firmicutes and anaerobic species affiliated with the Desulfobacterota. However, we hypothesized that there was an unknown diversity of acetylenotrophs in nature. We recently expanded the known distribution of acetylenotrophs via the isolation of the aerobic acetylenotroph, Bradyrhizobium sp. strain I71, from trichloroethylene (TCE)-contaminated soils (Akob et al. 2022). Strain I71 is a member of the class Alphaproteobacteria, and this is the first observation of an aerobic acetylenotroph in the Proteobacteria phylum. The isolate grows via heterotrophic and acetylenotrophic metabolism, and is diazotrophic, capable of nitrogen fixation. Acetylenotrophy and nitrogen fixation are the only two enzymatic reactions known to transform acetylene, and this is only the second isolate known to carry out both reactions (Akob et al. 2017, Baesman et al. 2019). Members of Bradyrhizobium are well studied for their abilities to improve plant health and increase crop yields by providing bioavailable nitrogen. The unique capability of Bradyrhizobium sp. strain I71 to utilize acetylene may increase the genus’ economic impact beyond agriculture as acetylenotrophy is closely linked to bioremediation of chlorinated contaminants (Mao et al. 2017, Gushgari-Doyle et al. 2021). Based on genome, cultivation, and protein prediction analysis, the ability to consume acetylene is likely not widespread within the genus Bradyrhizobium . These findings suggest that the suite of phenotypic capabilities of strain I71 may be unique and make it a good candidate for further study in several research avenues such as contaminant biodegradation and nutrient cycling.
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