Bernarda de S Gregório, Catarina S Carvalho, Gustavo Ramos, Lamarck Rocha, Charles H Stirton, Haroldo C de Lima, Charles E Zartman, Gwilym P Lewis, Benjamin M Torke, Cristiane Snak, Heriberto A D Higuita, Luciano P de Queiroz, Domingos Cardoso
{"title":"一种早期分支的乳突豆科植物Genistoid谱系的分子系统发育揭示了一个新的亚马逊属,从拟羊腿豆科植物分离出来","authors":"Bernarda de S Gregório, Catarina S Carvalho, Gustavo Ramos, Lamarck Rocha, Charles H Stirton, Haroldo C de Lima, Charles E Zartman, Gwilym P Lewis, Benjamin M Torke, Cristiane Snak, Heriberto A D Higuita, Luciano P de Queiroz, Domingos Cardoso","doi":"10.1093/botlinnean/boad059","DOIUrl":null,"url":null,"abstract":"Abstract Molecular phylogenetic studies focused on the early-branching papilionoid legumes have revealed many new clades and supported several generic realignments, yet the monophyly of some of the constituent genera has remained unassessed. This is the case for the Amazonian genus Clathrotropis of the tribe Ormosieae. The genus, as traditionally circumscribed, comprises seven species of trees, including some of the most ecologically hyper dominant taxa across the Amazonian terra firme and seasonally flooded forests. Here we employed a Bayesian analysis of densely sampled nuclear ribosomal ITS/5.8S and plastid matK and trnL intron DNA sequences to evaluate the monophyly of Clathrotropis. All individual and concatenated analyses concurred in showing the non-monophyletic nature of Clathrotropis, whose species fall into three distantly related lineages: one, comprised of C. brachypetala, C. brunnea, C. glaucophylla and the ecologically dominant C. macrocarpa, is circumscribed here as the new genus Cabari; the two others, comprising C. paradoxa and the widespread C. nitida, are more closely related to Spirotropis of the tribe Ormosieae. Such phylogeny-based dismemberment of Clathrotropis is further supported by vegetative, floral, fruit, and seed characters. Although the genes analysed in this study have provided phylogenetically informative data supporting the need for a new circumscription of Clathrotropis, we suggest that future phylogenomic studies should seek to better resolve the relationships of the newly described genus Cabari across the phylogenetically recalcitrant early-branching nodes of the Genistoid clade.","PeriodicalId":9178,"journal":{"name":"Botanical Journal of the Linnean Society","volume":"39 4","pages":"0"},"PeriodicalIF":2.3000,"publicationDate":"2023-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A molecular phylogeny of the early-branching Genistoid lineages of papilionoid legumes reveals a new Amazonian genus segregated from <i>Clathrotropis</i>\",\"authors\":\"Bernarda de S Gregório, Catarina S Carvalho, Gustavo Ramos, Lamarck Rocha, Charles H Stirton, Haroldo C de Lima, Charles E Zartman, Gwilym P Lewis, Benjamin M Torke, Cristiane Snak, Heriberto A D Higuita, Luciano P de Queiroz, Domingos Cardoso\",\"doi\":\"10.1093/botlinnean/boad059\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract Molecular phylogenetic studies focused on the early-branching papilionoid legumes have revealed many new clades and supported several generic realignments, yet the monophyly of some of the constituent genera has remained unassessed. This is the case for the Amazonian genus Clathrotropis of the tribe Ormosieae. The genus, as traditionally circumscribed, comprises seven species of trees, including some of the most ecologically hyper dominant taxa across the Amazonian terra firme and seasonally flooded forests. Here we employed a Bayesian analysis of densely sampled nuclear ribosomal ITS/5.8S and plastid matK and trnL intron DNA sequences to evaluate the monophyly of Clathrotropis. All individual and concatenated analyses concurred in showing the non-monophyletic nature of Clathrotropis, whose species fall into three distantly related lineages: one, comprised of C. brachypetala, C. brunnea, C. glaucophylla and the ecologically dominant C. macrocarpa, is circumscribed here as the new genus Cabari; the two others, comprising C. paradoxa and the widespread C. nitida, are more closely related to Spirotropis of the tribe Ormosieae. 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Although the genes analysed in this study have provided phylogenetically informative data supporting the need for a new circumscription of Clathrotropis, we suggest that future phylogenomic studies should seek to better resolve the relationships of the newly described genus Cabari across the phylogenetically recalcitrant early-branching nodes of the Genistoid clade.\",\"PeriodicalId\":9178,\"journal\":{\"name\":\"Botanical Journal of the Linnean Society\",\"volume\":\"39 4\",\"pages\":\"0\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2023-11-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Botanical Journal of the Linnean Society\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1093/botlinnean/boad059\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Botanical Journal of the Linnean Society","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/botlinnean/boad059","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
A molecular phylogeny of the early-branching Genistoid lineages of papilionoid legumes reveals a new Amazonian genus segregated from Clathrotropis
Abstract Molecular phylogenetic studies focused on the early-branching papilionoid legumes have revealed many new clades and supported several generic realignments, yet the monophyly of some of the constituent genera has remained unassessed. This is the case for the Amazonian genus Clathrotropis of the tribe Ormosieae. The genus, as traditionally circumscribed, comprises seven species of trees, including some of the most ecologically hyper dominant taxa across the Amazonian terra firme and seasonally flooded forests. Here we employed a Bayesian analysis of densely sampled nuclear ribosomal ITS/5.8S and plastid matK and trnL intron DNA sequences to evaluate the monophyly of Clathrotropis. All individual and concatenated analyses concurred in showing the non-monophyletic nature of Clathrotropis, whose species fall into three distantly related lineages: one, comprised of C. brachypetala, C. brunnea, C. glaucophylla and the ecologically dominant C. macrocarpa, is circumscribed here as the new genus Cabari; the two others, comprising C. paradoxa and the widespread C. nitida, are more closely related to Spirotropis of the tribe Ormosieae. Such phylogeny-based dismemberment of Clathrotropis is further supported by vegetative, floral, fruit, and seed characters. Although the genes analysed in this study have provided phylogenetically informative data supporting the need for a new circumscription of Clathrotropis, we suggest that future phylogenomic studies should seek to better resolve the relationships of the newly described genus Cabari across the phylogenetically recalcitrant early-branching nodes of the Genistoid clade.
期刊介绍:
The Botanical Journal of the Linnean Society publishes original papers on systematic and evolutionary botany and comparative studies of both living and fossil plants. Review papers are also welcomed which integrate fields such as cytology, morphogenesis, palynology and phytochemistry into a taxonomic framework. The Journal will only publish new taxa in exceptional circumstances or as part of larger monographic or phylogenetic revisions.