Shuai Huang, Mona Zehni, Ivan Dokmanić, Zhizhen Zhao
{"title":"基于空间一致性的三维未知视图层析成像正交矩阵检索","authors":"Shuai Huang, Mona Zehni, Ivan Dokmanić, Zhizhen Zhao","doi":"10.1137/22m1498218","DOIUrl":null,"url":null,"abstract":"Unknown view tomography (UVT) reconstructs a 3D density map from its 2D projections at unknown, random orientations. A line of work starting with Kam (1980) employs the method of moments with rotation-invariant Fourier features to solve UVT in the frequency domain, assuming that the orientations are uniformly distributed. This line of work includes the recent orthogonal matrix retrieval (OMR) approaches based on matrix factorization, which, while elegant, either require side information about the density that is not available or fail to be sufficiently robust. For OMR to break free from those restrictions, we propose to jointly recover the density map and the orthogonal matrices by requiring that they be mutually consistent. We regularize the resulting nonconvex optimization problem by a denoised reference projection and a nonnegativity constraint. This is enabled by the new closed-form expressions for spatial autocorrelation features. Further, we design an easy-to-compute initial density map which effectively mitigates the nonconvexity of the reconstruction problem. Experimental results show that the proposed OMR with spatial consensus is more robust and performs significantly better than the previous state-of-the-art OMR approach in the typical low signal-to-noise-ratio scenario of 3D UVT.","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2023-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Orthogonal Matrix Retrieval with Spatial Consensus for 3D Unknown View Tomography\",\"authors\":\"Shuai Huang, Mona Zehni, Ivan Dokmanić, Zhizhen Zhao\",\"doi\":\"10.1137/22m1498218\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Unknown view tomography (UVT) reconstructs a 3D density map from its 2D projections at unknown, random orientations. A line of work starting with Kam (1980) employs the method of moments with rotation-invariant Fourier features to solve UVT in the frequency domain, assuming that the orientations are uniformly distributed. This line of work includes the recent orthogonal matrix retrieval (OMR) approaches based on matrix factorization, which, while elegant, either require side information about the density that is not available or fail to be sufficiently robust. For OMR to break free from those restrictions, we propose to jointly recover the density map and the orthogonal matrices by requiring that they be mutually consistent. We regularize the resulting nonconvex optimization problem by a denoised reference projection and a nonnegativity constraint. This is enabled by the new closed-form expressions for spatial autocorrelation features. Further, we design an easy-to-compute initial density map which effectively mitigates the nonconvexity of the reconstruction problem. Experimental results show that the proposed OMR with spatial consensus is more robust and performs significantly better than the previous state-of-the-art OMR approach in the typical low signal-to-noise-ratio scenario of 3D UVT.\",\"PeriodicalId\":2,\"journal\":{\"name\":\"ACS Applied Bio Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2023-08-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Bio Materials\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1137/22m1498218\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MATERIALS SCIENCE, BIOMATERIALS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1137/22m1498218","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
Orthogonal Matrix Retrieval with Spatial Consensus for 3D Unknown View Tomography
Unknown view tomography (UVT) reconstructs a 3D density map from its 2D projections at unknown, random orientations. A line of work starting with Kam (1980) employs the method of moments with rotation-invariant Fourier features to solve UVT in the frequency domain, assuming that the orientations are uniformly distributed. This line of work includes the recent orthogonal matrix retrieval (OMR) approaches based on matrix factorization, which, while elegant, either require side information about the density that is not available or fail to be sufficiently robust. For OMR to break free from those restrictions, we propose to jointly recover the density map and the orthogonal matrices by requiring that they be mutually consistent. We regularize the resulting nonconvex optimization problem by a denoised reference projection and a nonnegativity constraint. This is enabled by the new closed-form expressions for spatial autocorrelation features. Further, we design an easy-to-compute initial density map which effectively mitigates the nonconvexity of the reconstruction problem. Experimental results show that the proposed OMR with spatial consensus is more robust and performs significantly better than the previous state-of-the-art OMR approach in the typical low signal-to-noise-ratio scenario of 3D UVT.