{"title":"ISC-Transunet:基于自注意与卷积融合的医学图像分割网络","authors":"Fang Li, Siyu Pei, Ziqun Zhang, Fuming Yang","doi":"10.1142/s0219519423401073","DOIUrl":null,"url":null,"abstract":"In the current medical image segmentation network, the combination of CNN and Transformer has become a mainstream trend. However, the inherent limitations of convolution operation in CNN and insufficient information interaction in Transformer affect the segmentation performance of the network. To solve these problems, an integrated self-attention and convolution medical image segmentation network (ISC-TransUNet) is proposed in this paper. The network consists of encoder, decoder and jump connection. First, the encoder uses a hybrid structure of BoTNet and Transformer to capture more comprehensive image information and reduce additional computing overhead. Then, the decoder uses an upper sampler cascaded by multiple DUpsampling upper blocks to accurately recover the pixel-level prediction. Finally, the feature fusion of encoder and decoder at different resolutions is realized by ResPath jump connection, which reduces the semantic difference between encoder and decoder. Through experiments on the Synapse multi-organ segmentation dataset, compared with the baseline model TransUNet, Dice similarity coefficient of ISC-TransUNet was improved by 1.13%, Hausdorff distance was reduced by 2.38%, and weight was maintained. The experimental results show that the network can effectively segment tissues and organs in medical images, which has important theoretical significance and application value for intelligent clinical diagnosis and treatment.","PeriodicalId":50135,"journal":{"name":"Journal of Mechanics in Medicine and Biology","volume":"1 1","pages":"0"},"PeriodicalIF":0.8000,"publicationDate":"2023-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"ISC-Transunet: Medical Image Segmentation Network Based on the Integration of Self-Attention and Convolution\",\"authors\":\"Fang Li, Siyu Pei, Ziqun Zhang, Fuming Yang\",\"doi\":\"10.1142/s0219519423401073\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In the current medical image segmentation network, the combination of CNN and Transformer has become a mainstream trend. However, the inherent limitations of convolution operation in CNN and insufficient information interaction in Transformer affect the segmentation performance of the network. To solve these problems, an integrated self-attention and convolution medical image segmentation network (ISC-TransUNet) is proposed in this paper. The network consists of encoder, decoder and jump connection. First, the encoder uses a hybrid structure of BoTNet and Transformer to capture more comprehensive image information and reduce additional computing overhead. Then, the decoder uses an upper sampler cascaded by multiple DUpsampling upper blocks to accurately recover the pixel-level prediction. Finally, the feature fusion of encoder and decoder at different resolutions is realized by ResPath jump connection, which reduces the semantic difference between encoder and decoder. Through experiments on the Synapse multi-organ segmentation dataset, compared with the baseline model TransUNet, Dice similarity coefficient of ISC-TransUNet was improved by 1.13%, Hausdorff distance was reduced by 2.38%, and weight was maintained. The experimental results show that the network can effectively segment tissues and organs in medical images, which has important theoretical significance and application value for intelligent clinical diagnosis and treatment.\",\"PeriodicalId\":50135,\"journal\":{\"name\":\"Journal of Mechanics in Medicine and Biology\",\"volume\":\"1 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.8000,\"publicationDate\":\"2023-10-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Mechanics in Medicine and Biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1142/s0219519423401073\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOPHYSICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Mechanics in Medicine and Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1142/s0219519423401073","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOPHYSICS","Score":null,"Total":0}
ISC-Transunet: Medical Image Segmentation Network Based on the Integration of Self-Attention and Convolution
In the current medical image segmentation network, the combination of CNN and Transformer has become a mainstream trend. However, the inherent limitations of convolution operation in CNN and insufficient information interaction in Transformer affect the segmentation performance of the network. To solve these problems, an integrated self-attention and convolution medical image segmentation network (ISC-TransUNet) is proposed in this paper. The network consists of encoder, decoder and jump connection. First, the encoder uses a hybrid structure of BoTNet and Transformer to capture more comprehensive image information and reduce additional computing overhead. Then, the decoder uses an upper sampler cascaded by multiple DUpsampling upper blocks to accurately recover the pixel-level prediction. Finally, the feature fusion of encoder and decoder at different resolutions is realized by ResPath jump connection, which reduces the semantic difference between encoder and decoder. Through experiments on the Synapse multi-organ segmentation dataset, compared with the baseline model TransUNet, Dice similarity coefficient of ISC-TransUNet was improved by 1.13%, Hausdorff distance was reduced by 2.38%, and weight was maintained. The experimental results show that the network can effectively segment tissues and organs in medical images, which has important theoretical significance and application value for intelligent clinical diagnosis and treatment.
期刊介绍:
This journal has as its objective the publication and dissemination of original research (even for "revolutionary concepts that contrast with existing theories" & "hypothesis") in all fields of engineering-mechanics that includes mechanisms, processes, bio-sensors and bio-devices in medicine, biology and healthcare. The journal publishes original papers in English which contribute to an understanding of biomedical engineering and science at a nano- to macro-scale or an improvement of the methods and techniques of medical, biological and clinical treatment by the application of advanced high technology.
Journal''s Research Scopes/Topics Covered (but not limited to):
Artificial Organs, Biomechanics of Organs.
Biofluid Mechanics, Biorheology, Blood Flow Measurement Techniques, Microcirculation, Hemodynamics.
Bioheat Transfer and Mass Transport, Nano Heat Transfer.
Biomaterials.
Biomechanics & Modeling of Cell and Molecular.
Biomedical Instrumentation and BioSensors that implicate ''human mechanics'' in details.
Biomedical Signal Processing Techniques that implicate ''human mechanics'' in details.
Bio-Microelectromechanical Systems, Microfluidics.
Bio-Nanotechnology and Clinical Application.
Bird and Insect Aerodynamics.
Cardiovascular/Cardiac mechanics.
Cardiovascular Systems Physiology/Engineering.
Cellular and Tissue Mechanics/Engineering.
Computational Biomechanics/Physiological Modelling, Systems Physiology.
Clinical Biomechanics.
Hearing Mechanics.
Human Movement and Animal Locomotion.
Implant Design and Mechanics.
Mathematical modeling.
Mechanobiology of Diseases.
Mechanics of Medical Robotics.
Muscle/Neuromuscular/Musculoskeletal Mechanics and Engineering.
Neural- & Neuro-Behavioral Engineering.
Orthopedic Biomechanics.
Reproductive and Urogynecological Mechanics.
Respiratory System Engineering...