基于TCGA数据库的急性髓系白血病鉴定基因的生存分析

Wenyan Zhao, Peiyan Wang
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引用次数: 0

摘要

目的:本研究旨在通过整合基因组和临床因素建立急性髓性白血病(AML)的综合预后模型。AML是一种普遍存在的恶性骨髓疾病,对成年人群有重大影响。尽管已有关于某些预后基因的知识,但缺乏一个考虑基因组和临床变量的整体模型来评估总体生存。本研究试图通过分析来自癌症基因组图谱(TCGA)数据库的基因表达谱和临床属性来填补这一空白,重点是通过结合来自京都基因与基因组百科全书(KEGG)途径数据库的疾病相关基因来确定这些因素对AML患者生存的影响。方法:我们对TCGA数据库中173例AML患者的完整基因表达谱和临床数据进行了分析。利用先进的统计技术,我们探讨了基因表达水平、临床特征和患者生存之间的关系。从KEGG通路数据库中鉴定的疾病相关基因被整合到分析中,以提高模型的预测能力。采用Cox比例风险回归和机器学习算法建立和优化预后模型。结果:我们的分析揭示了基因表达模式和临床属性对AML患者生存的影响。通过整合KEGG通路数据库中的疾病相关基因,我们观察到该模型预测生存结果的能力显著增强。优化的预后模型成功地整合了基因组和临床因素,为AML患者的生存提供了更准确的评估。结论:本研究强调了结合基因组和临床因素预测AML患者生存结局的重要性。我们的综合预后模型,由来自KEGG通路数据库的疾病相关基因丰富,提供了一种提高生存预测准确性的创新方法。通过揭示基因表达谱与临床属性之间复杂的相互作用,本研究有助于加深对AML预后的理解,并为更有效的个性化治疗策略铺平道路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Survival Analysis on Identified Genes in Acute Myeloid Leukemia Based on TCGA Database
Objective: This study aims to develop a comprehensive prognostic model for acute myeloid leukemia (AML) by integrating genomic and clinical factors. AML is a prevalent malignant bone marrow disorder with a significant impact on adult populations. Despite existing knowledge about certain prognostic genes, a holistic model considering both genomic and clinical variables for assessing overall survival is lacking. This research endeavors to fill this gap by analyzing gene expression profiles and clinical attributes from The Cancer Genome Atlas (TCGA) database, with a focus on determining the influence of these factors on AML patient survival by incorporating disease-associated genes sourced from the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway database. Methods: We conducted an analysis of complete gene expression profiles and clinical data from 173 AML patients within the TCGA database. Utilizing advanced statistical techniques, we explored the relationships between gene expression levels, clinical features, and patient survival. Disease-related genes identified from the KEGG pathway database were integrated into the analysis to enhance the model’s predictive power. Cox proportional hazards regression and machine learning algorithms were employed to develop and optimize the prognostic model. Results: Our analysis revealed substantial insights into the impact of gene expression patterns and clinical attributes on the survival of AML patients. By incorporating disease-associated genes from the KEGG pathway database, we observed a notable enhancement in the model’s ability to predict survival outcomes. The optimized prognostic model successfully integrated both genomic and clinical factors, providing a more accurate assessment of AML patient survival. Conclusion: This study underscores the significance of combining genomic and clinical factors in predicting survival outcomes for AML patients. Our comprehensive prognostic model, enriched by disease-related genes from the KEGG pathway database, offers an innovative approach to enhancing the accuracy of survival predictions. By shedding light on the intricate interplay between gene expression profiles and clinical attributes, this research contributes to a deeper understanding of AML prognosis and paves the way for more effective personalized treatment strategies.
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