非线性混合效应模型的可视化模型诊断

IF 2.3 4区 计算机科学 Q3 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
R Journal Pub Date : 2023-08-26 DOI:10.32614/rj-2023-026
Eun-Hwa Kang, Myungji Ko, Eun-Kyung Lee
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引用次数: 0

摘要

当数据在同一单位内重复测量或在单位间相互关联时,非线性混合效应模型是有用的。这些模型广泛应用于医学、疾病力学、药理学、生态学、社会科学、心理学等领域。对非线性混合效应模型进行拟合后,模型诊断是验证拟合结果可靠性的关键。视觉预测检查(VPC)最近被强调为药物计量模型的视觉诊断工具。该方法也适用于一般的非线性混合效应模型。然而,现有R包中针对vpc的功能是专门用于药物计量模型诊断的,并不适合一般的非线性混合效应模型。在本文中,我们提出了nlmeVPC,一个R包,用于各种非线性混合效应模型的视觉诊断。nlmeVPC包允许更多样化的模型诊断,包括可视化诊断工具,它扩展了vpc的概念以及现有R包的功能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
nlmeVPC: Visual Model Diagnosis for the Nonlinear Mixed Effect Model
A nonlinear mixed effects model is useful when the data are repeatedly measured within the same unit or correlated between units. Such models are widely used in medicine, disease mechanics, pharmacology, ecology, social science, psychology, etc. After fitting the nonlinear mixed effect model, model diagnostics are essential for verifying that the results are reliable. The visual predictive check (VPC) has recently been highlighted as a visual diagnostic tool for pharmacometric models. This method can also be applied to general nonlinear mixed effects models. However, functions for VPCs in existing R packages are specialized for pharmacometric model diagnosis, and are not suitable for general nonlinear mixed effect models. In this paper, we propose nlmeVPC, an R package for the visual diagnosis of various nonlinear mixed effect models. The nlmeVPC package allows for more diverse model diagnostics, including visual diagnostic tools that extend the concept of VPCs along with the capabilities of existing R packages.
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来源期刊
R Journal
R Journal COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS-STATISTICS & PROBABILITY
CiteScore
2.70
自引率
0.00%
发文量
40
审稿时长
>12 weeks
期刊介绍: The R Journal is the open access, refereed journal of the R project for statistical computing. It features short to medium length articles covering topics that should be of interest to users or developers of R. The R Journal intends to reach a wide audience and have a thorough review process. Papers are expected to be reasonably short, clearly written, not too technical, and of course focused on R. Authors of refereed articles should take care to: - put their contribution in context, in particular discuss related R functions or packages; - explain the motivation for their contribution; - provide code examples that are reproducible.
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