机制QSAR分析预测不同杂环作为选择性大麻素2受体抑制剂的结合亲和力

IF 2.8 3区 综合性期刊 Q2 MULTIDISCIPLINARY SCIENCES
Rahul D. Jawarkar, Magdi E. A. Zaki, Sami A. Al-Hussain, Abdullah Yahya Abdullah Alzahrani, Long Chiau Ming, Abdul Samad, Summya Rashid, Suraj Mali, Gehan M. Elossaily
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引用次数: 0

摘要

由于其改善的生物学特性,CB2R是神经性疼痛和情绪障碍的迷人靶点。采用1296种具有不同结构特性的大麻素-2受体抑制剂的实验数据,根据经合组织的指导方针建立了QSAR模型。本研究选取拟合参数为R2:0.78的最佳预测模型(分割比为80:20);F:623.6,内部验证参数,如Q2Loo:0.78;CCCcv: 0.87和外部验证参数,如R2ext:0.77;Q2F1:0.7730;Q2F2:0.7730;Q2F3:0.76;CCCext: 0.87。在此之后,使用50:50的分割比例开发了另一个QSAR模型,用于训练和预测集,然后交换以50:50的比例评估构建的QSAR模型的鲁棒性,这也使人们对化学空间有了更深入的了解。此外,我们通过药效团模型验证了QSAR结果,并得到了分子对接、MD模拟、MMGBSA和ADME研究的支持。因此,这项工作可能促进大麻素2受体抑制剂的开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Mechanistic QSAR analysis to predict the binding affinity of diverse heterocycles as selective cannabinoid 2 receptor inhibitor
CB2R are fascinating targets for neuropathic pain and mood disorders because of their improved biological characteristics. Experimental data on 1296 cannabinoid-2 receptor inhibitors with different structural properties were used to develop a QSAR model following OECD guidelines. This study selected the best-predicted model (80:20 splitting ratio) with fitting parameters, such as R2:0.78; F:623.6, Internal validation parameters, such as Q2Loo:0.78; CCCcv: 0.87 and external validation parameters, such as R2ext:0.77; Q2F1:0.7730; Q2F2:0.7730; Q2F3:0.76; CCCext:0.87. Following this, another QSAR model was developed by using a 50:50 split ratio for thetraining and the prediction sets, which were then swapped to evaluate the robustness of the built QSAR model by the 50:50 ratio, which also gives a deeper understanding of the chemical space. In addition, we have confirmed the QSAR result with pharmacophore modelling, and supported by molecular docking, MD simulation, MMGBSA and ADME studies. Thus, this work may enable cannabinoid 2 receptor inhibsitor development.
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来源期刊
Journal of Taibah University for Science
Journal of Taibah University for Science MULTIDISCIPLINARY SCIENCES-
CiteScore
6.60
自引率
6.10%
发文量
102
审稿时长
19 weeks
期刊介绍: Journal of Taibah University for Science (JTUSCI) is an international scientific journal for the basic sciences. This journal is produced and published by Taibah University, Madinah, Kingdom of Saudi Arabia. The scope of the journal is to publish peer reviewed research papers, short communications, reviews and comments as well as the scientific conference proceedings in a special issue. The emphasis is on biology, geology, chemistry, environmental control, mathematics and statistics, nanotechnology, physics, and related fields of study. The JTUSCI now quarterly publishes four issues (Jan, Apr, Jul and Oct) per year. Submission to the Journal is based on the understanding that the article has not been previously published in any other form and is not considered for publication elsewhere.
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