加速失效时间有限混合与R包fmrs混合回归模型稀疏估计

Farhad Shokoohi
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引用次数: 0

摘要

在过去的几十年里,人们在不同的环境下对大维度数据中的变量选择进行了广泛的研究。在最近的一篇文章中,Shokoohi等人[29,DOI:10.1214/18-AOAS1198]提出了一种在有限混合加速失效时间回归模型中进行变量选择的方法,用于研究时间到事件数据,以捕获种群内的异质性并考虑审查。在本文中,我们引入了fmrs包,它实现了这些模型的变量选择方法。此外,作为副产品,fmrs包有助于有限混合回归模型中的变量选择。该包还集成了一个基于组件的调优参数选择机制。常用的惩罚,如最小绝对收缩和选择算子,以及平滑剪裁的绝对偏差,被整合到fmrs中。此外,该软件包还提供了非混合回归模型的选项。为了提高优化速度,选择了C语言。我们提供了fmrs原理和优化策略的概述。动手的插图提出,以帮助用户熟悉fmrs。最后,我们将fmrs应用于肺癌数据集,并观察到双组分混合模型揭示了具有更强侵袭性疾病形式的亚组,显示出较低的生存时间。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Sparse Estimation in Finite Mixture of Accelerated Failure Time and Mixture of Regression Models with R Package fmrs
Variable selection in large-dimensional data has been extensively studied in different settings over the past decades. In a recent article, Shokoohi et. al. [29, DOI:10.1214/18-AOAS1198] proposed a method for variable selection in finite mixture of accelerated failure time regression models for studies on time-to-event data to capture heterogeneity within the population and account for censoring. In this paper, we introduce the fmrs package, which implements the variable selection methodology for such models. Furthermore, as a byproduct, the fmrs package facilitates variable selection in finite mixture regression models. The package also incorporates a tuning parameter selection mechanism based on component-wise bic. Commonly used penalties, such as Least Absolute Shrinkage and Selection Operator, and Smoothly Clipped Absolute Deviation, are integrated into fmrs. Additionally, the package offers an option for non-mixture regression models. The C language is chosen to boost the optimization speed. We provide an overview of the fmrs principles and the strategies employed for optimization. Hands-on illustrations are presented to help users get acquainted with fmrs. Finally, we apply fmrs to a lung cancer dataset and observe that a two-component mixture model reveals a subgroup with a more aggressive form of the disease, displaying a lower survival time.
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