基于微滴等分操作和预测分析的MEDA生物芯片自适应误差恢复

Zhanwei Zhong, Zipeng Li, K. Chakrabarty
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引用次数: 23

摘要

数字微流控生物芯片(dmfb)越来越多地用于生物化学实验室的自动化生物分析。然而,传统的dmfb存在一些关键缺点:1)不能灵活地改变液滴体积;2)片上传感器集成困难;3)需要特殊的制造工艺。为了克服这些问题,最近提出了基于微电极点阵列(MEDA)的dmfb。然而,由于芯片缺陷和生化实验固有的不可预测性,在MEDA DMFB上可能会发生错误。通过利用实时传感和先进的MEDA特异性液滴操作,我们提出了精细的MEDA错误恢复解决方案。所提出的方法依赖于自适应液滴等分操作和混合的预测分析。在三个有代表性的基准测试上的实验结果证明了所提出的错误恢复策略的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Adaptive error recovery in MEDA biochips based on droplet-aliquot operations and predictive analysis
Digital microfluidic biochips (DMFBs) are being increasingly used in biochemistry labs for automating bioassays. However, traditional DMFBs suffer from some key shortcomings: 1) inability to vary droplet volume in a flexible manner; 2) difficulty of integrating on-chip sensors; 3) the need for special fabrication processes. To overcome these problems, DMFBs based on micro-electrode-dot-array (MEDA) have recently be-en proposed. However, errors are likely to occur on a MEDA DMFB due to chip defects and the unpredictability inherent to biochemical experiments. We present fine-grained error-recovery solutions for MEDA by exploiting real-time sensing and advanced MEDA-specific droplet operations. The proposed methods rely on adaptive droplet-aliquot operations and predictive analysis of mixing. Experimental results on three representative benchmarks demonstrate the efficiency of the proposed error-recovery strategy.
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