遗传畸形诊断决策支持系统的建立

Kaya Kuru, M. Niranjan, Y. Tunca
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引用次数: 3

摘要

在面部畸形的临床诊断中,遗传学家试图在细胞或分子技术探索之前通过将面部特征联系起来来识别潜在的综合征。在许多综合征中正确地确定基因型-表型相关性是一项劳动密集型的工作,特别是对于非常罕见的疾病。使用基于计算机的预诊断系统可以提供有效的决策支持,特别是当只有很少以前的例子存在或在远程环境中,专家知识不容易获得。在这项工作中,我们发展并证明了通过二维人脸图像处理来准确分类畸形人脸是可行的。我们通过构建一个发表在学术期刊上的畸形脸数据集,在真实的患者图像数据上测试了所提出的系统,从而获得了关于该综合征的准确诊断信息。我们的统计方法是根据主成分分析(PCA)和留一评估方案来量化准确性的面部图像数据。该方法已在包括75例的15个证候中进行了测试,每个证候5例。诊断成功率为79%。可以得出结论,由于面部发育受到许多基因的影响,特别是引起综合征的基因的影响,因此,使用计算机辅助机器学习算法可以典型地诊断出大量表明面部异常特征模式的综合征。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Establishment of a Diagnostic Decision Support System in Genetic Dysmorphology
In the clinical diagnosis of facial dysmorphology, geneticists attempt to identify the underlying syndromes by associating facial features before cyto or molecular techniques are explored. Specifying genotype-phenotype correlations correctly among many syndromes is labor intensive especially for very rare diseases. The use of a computer based prediagnosis system can offer effective decision support particularly when only very few previous examples exist or in a remote environment where expert knowledge is not readily accessible. In this work we develop and demonstrate that accurate classification of dysmorphic faces is feasible by image processing of two dimensional face images. We test the proposed system on real patient image data by constructing a dataset of dysmorphic faces published in scholarly journals, hence having accurate diagnostic information about the syndrome. Our statistical methodology represents facial image data in terms of principal component analysis (PCA) and a leave one out evaluation scheme to quantify accuracy. The methodology has been tested with 15 syndromes including 75 cases, 5 examples per syndrome. A diagnosis success rate of 79% has been established. It can be concluded that a great number of syndromes indicating a characteristic pattern of facial anomalies can be typically diagnosed by employing computer-assisted machine learning algorithms since a face develops under the influence of many genes, particularly the genes causing syndromes.
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