{"title":"数据盲半监督GAN对隐私意识COVID-19胸部x射线分类的数据充分性偏差影响","authors":"Javier Pastorino, A. Biswas","doi":"10.1145/3535508.3545560","DOIUrl":null,"url":null,"abstract":"Supervised machine learning models are, by definition, data-sighted, requiring to view all or most parts of the training dataset which are labeled. This paradigm presents two bottlenecks which are intertwined: risk of exposing sensitive data samples to the third-party site with machine learning engineers, and time-consuming, laborious, bias-prone nature of data annotations by the personnel at the data source site. In this paper we studied learning impact of data adequacy as bias source in a data-blinded semi-supervised learning model for covid chest X-ray classification. Data-blindedness was put in action on a semi-supervised generative adversarial network to generate synthetic data based only on a few labeled data samples and concurrently learn to classify targets. We designed and developed a data-blind COVID-19 patient classifier that classifies whether an individual is suffering from COVID-19 or other type of illness with the ultimate goal of producing a system to assist in labeling large datasets. However, the availability of the labels in the training data had an impact in the model performance, and when a new disease spreads, as it was COVID9-19 in 2019, access to labeled data may be limited. Here, we studied how bias in the labeled sample distribution per class impacted in classification performance for three models: a Convolution Neural Network based classifier (CNN), a semi-supervised GAN using the source data (SGAN), and finally our proposed data-blinded semi-supervised GAN (BSGAN). Data-blind prevents machine learning engineers from directly accessing the source data during training, thereby ensuring data confidentiality. This was achieved by using synthetic data samples, generated by a separate generative model which were then used to train the proposed model. Our model achieved comparable performance, with the trade-off between a privacy-aware model and a traditionally-learnt model of 0.05 AUC-score, and it maintained stable, following the same learning performance as the data distribution was changed.","PeriodicalId":354504,"journal":{"name":"Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","volume":"79 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-08-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Data adequacy bias impact in a data-blinded semi-supervised GAN for privacy-aware COVID-19 chest X-ray classification\",\"authors\":\"Javier Pastorino, A. Biswas\",\"doi\":\"10.1145/3535508.3545560\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Supervised machine learning models are, by definition, data-sighted, requiring to view all or most parts of the training dataset which are labeled. This paradigm presents two bottlenecks which are intertwined: risk of exposing sensitive data samples to the third-party site with machine learning engineers, and time-consuming, laborious, bias-prone nature of data annotations by the personnel at the data source site. In this paper we studied learning impact of data adequacy as bias source in a data-blinded semi-supervised learning model for covid chest X-ray classification. Data-blindedness was put in action on a semi-supervised generative adversarial network to generate synthetic data based only on a few labeled data samples and concurrently learn to classify targets. We designed and developed a data-blind COVID-19 patient classifier that classifies whether an individual is suffering from COVID-19 or other type of illness with the ultimate goal of producing a system to assist in labeling large datasets. However, the availability of the labels in the training data had an impact in the model performance, and when a new disease spreads, as it was COVID9-19 in 2019, access to labeled data may be limited. Here, we studied how bias in the labeled sample distribution per class impacted in classification performance for three models: a Convolution Neural Network based classifier (CNN), a semi-supervised GAN using the source data (SGAN), and finally our proposed data-blinded semi-supervised GAN (BSGAN). Data-blind prevents machine learning engineers from directly accessing the source data during training, thereby ensuring data confidentiality. This was achieved by using synthetic data samples, generated by a separate generative model which were then used to train the proposed model. Our model achieved comparable performance, with the trade-off between a privacy-aware model and a traditionally-learnt model of 0.05 AUC-score, and it maintained stable, following the same learning performance as the data distribution was changed.\",\"PeriodicalId\":354504,\"journal\":{\"name\":\"Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics\",\"volume\":\"79 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-08-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1145/3535508.3545560\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3535508.3545560","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Data adequacy bias impact in a data-blinded semi-supervised GAN for privacy-aware COVID-19 chest X-ray classification
Supervised machine learning models are, by definition, data-sighted, requiring to view all or most parts of the training dataset which are labeled. This paradigm presents two bottlenecks which are intertwined: risk of exposing sensitive data samples to the third-party site with machine learning engineers, and time-consuming, laborious, bias-prone nature of data annotations by the personnel at the data source site. In this paper we studied learning impact of data adequacy as bias source in a data-blinded semi-supervised learning model for covid chest X-ray classification. Data-blindedness was put in action on a semi-supervised generative adversarial network to generate synthetic data based only on a few labeled data samples and concurrently learn to classify targets. We designed and developed a data-blind COVID-19 patient classifier that classifies whether an individual is suffering from COVID-19 or other type of illness with the ultimate goal of producing a system to assist in labeling large datasets. However, the availability of the labels in the training data had an impact in the model performance, and when a new disease spreads, as it was COVID9-19 in 2019, access to labeled data may be limited. Here, we studied how bias in the labeled sample distribution per class impacted in classification performance for three models: a Convolution Neural Network based classifier (CNN), a semi-supervised GAN using the source data (SGAN), and finally our proposed data-blinded semi-supervised GAN (BSGAN). Data-blind prevents machine learning engineers from directly accessing the source data during training, thereby ensuring data confidentiality. This was achieved by using synthetic data samples, generated by a separate generative model which were then used to train the proposed model. Our model achieved comparable performance, with the trade-off between a privacy-aware model and a traditionally-learnt model of 0.05 AUC-score, and it maintained stable, following the same learning performance as the data distribution was changed.