Rehab N. Al-Mousa, Alaa Alshaal, Shahinaz Abbas, Khouzama Kountar
{"title":"叙利亚部分扁豆基因型遗传变异的ISSR分析","authors":"Rehab N. Al-Mousa, Alaa Alshaal, Shahinaz Abbas, Khouzama Kountar","doi":"10.54172/mjsc.v38i2.1204","DOIUrl":null,"url":null,"abstract":"Lentil (Lens culinaris Medik) plays a significant role in human and animal nutrition. It is important to generate baseline information on genetic diversity of local and introduced lentil in Syria. Therefore, this study aimed to assess diversity and relationship among two local varieties and 35 introduced lentil lines from ICARDA using 20 Inter Simple Sequence Repeats (ISSR) primers.18 primers were able to amplify DNA bands with a total of 184 bands. Primers ISSR5, ISSR11, ISSR13, ISSR15 and ISSR16 presented 100% polymorphism percentage. The mean value of polymorphism percentage was 87.31%. ISSR primers could identify 19 unique bands in all genotypes, 12 of them were positive bands (present) and 7 were negative bands (absent). Primer ISSR11 was able to detect 3 positive unique bands in genotype Ln20. The UPGMA (unweighted pair group method with arithmetical averages) clustering based on ISSR data grouped 37 lentil genotypes into 6 clusters. The lowest genetic distance (0.20) was observed between (Ln15 and Ln16, Ln21 and Ln22, Ln27 and Ln28) which proves that they are closely related. While Ln24 presented the highest genetic distance (0.49) with both Ln18 and Idleb3 which refers to their genetic divergence.","PeriodicalId":276609,"journal":{"name":"Al-Mukhtar Journal of Sciences","volume":"96 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-06-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"ISSR Analysis to Detect Genetic Variation Among Some Lentil Genotypes in Syria\",\"authors\":\"Rehab N. Al-Mousa, Alaa Alshaal, Shahinaz Abbas, Khouzama Kountar\",\"doi\":\"10.54172/mjsc.v38i2.1204\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Lentil (Lens culinaris Medik) plays a significant role in human and animal nutrition. It is important to generate baseline information on genetic diversity of local and introduced lentil in Syria. Therefore, this study aimed to assess diversity and relationship among two local varieties and 35 introduced lentil lines from ICARDA using 20 Inter Simple Sequence Repeats (ISSR) primers.18 primers were able to amplify DNA bands with a total of 184 bands. Primers ISSR5, ISSR11, ISSR13, ISSR15 and ISSR16 presented 100% polymorphism percentage. The mean value of polymorphism percentage was 87.31%. ISSR primers could identify 19 unique bands in all genotypes, 12 of them were positive bands (present) and 7 were negative bands (absent). Primer ISSR11 was able to detect 3 positive unique bands in genotype Ln20. The UPGMA (unweighted pair group method with arithmetical averages) clustering based on ISSR data grouped 37 lentil genotypes into 6 clusters. The lowest genetic distance (0.20) was observed between (Ln15 and Ln16, Ln21 and Ln22, Ln27 and Ln28) which proves that they are closely related. While Ln24 presented the highest genetic distance (0.49) with both Ln18 and Idleb3 which refers to their genetic divergence.\",\"PeriodicalId\":276609,\"journal\":{\"name\":\"Al-Mukhtar Journal of Sciences\",\"volume\":\"96 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-06-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Al-Mukhtar Journal of Sciences\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.54172/mjsc.v38i2.1204\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Al-Mukhtar Journal of Sciences","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.54172/mjsc.v38i2.1204","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
小扁豆(Lens culinaris Medik)在人类和动物营养中起着重要作用。重要的是产生关于叙利亚当地扁豆和引种扁豆遗传多样性的基线信息。因此,本研究利用20条ISSR (Inter Simple Sequence Repeats)引物,对来自ICARDA的2个地方品种和35个引进扁豆品系的多样性和亲缘关系进行了分析。18条引物共扩增出184条条带。引物ISSR5、ISSR11、ISSR13、ISSR15和ISSR16多态性率为100%。多态性百分比平均值为87.31%。ISSR引物在所有基因型中可识别出19条独特条带,其中12条为阳性条带(存在),7条为阴性条带(缺失)。引物ISSR11能够在Ln20基因型中检测到3个阳性独特条带。基于ISSR数据的UPGMA (unweighted pair group method with arithmetic average)聚类将37个小扁豆基因型分为6个聚类。Ln15与Ln16、Ln21与Ln22、Ln27与Ln28的遗传距离最小(0.20),表明二者亲缘关系较近。Ln24与Ln18和Idleb3的遗传距离最高(0.49),说明了两者的遗传差异。
ISSR Analysis to Detect Genetic Variation Among Some Lentil Genotypes in Syria
Lentil (Lens culinaris Medik) plays a significant role in human and animal nutrition. It is important to generate baseline information on genetic diversity of local and introduced lentil in Syria. Therefore, this study aimed to assess diversity and relationship among two local varieties and 35 introduced lentil lines from ICARDA using 20 Inter Simple Sequence Repeats (ISSR) primers.18 primers were able to amplify DNA bands with a total of 184 bands. Primers ISSR5, ISSR11, ISSR13, ISSR15 and ISSR16 presented 100% polymorphism percentage. The mean value of polymorphism percentage was 87.31%. ISSR primers could identify 19 unique bands in all genotypes, 12 of them were positive bands (present) and 7 were negative bands (absent). Primer ISSR11 was able to detect 3 positive unique bands in genotype Ln20. The UPGMA (unweighted pair group method with arithmetical averages) clustering based on ISSR data grouped 37 lentil genotypes into 6 clusters. The lowest genetic distance (0.20) was observed between (Ln15 and Ln16, Ln21 and Ln22, Ln27 and Ln28) which proves that they are closely related. While Ln24 presented the highest genetic distance (0.49) with both Ln18 and Idleb3 which refers to their genetic divergence.