对称破缺是生物分子机器进行“有用工作”的物理基础

V. Tverdislov
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引用次数: 0

摘要

生命系统运作的物理基础是分子机器。“有用工作”的表现是其生物功能的本质。分子机器是手性的有层次结构的装置(结构)。它们通过改变或切换其手性结构元素的对称性来循环变换能量的形式,正好实现了其中所选择的“准机械”自由度。手性现象允许大分子机器在折叠过程中形成离散的手性符号交替结构层次:从脱氧核糖和氨基酸中的不对称碳水平开始。在此之前,我们已经确定并分析了分子内结构水平(DNA为D-L-D-L)和蛋白质为L-D-L-D的手性符号的交替趋势。分子内和超分子结构的螺旋度和超螺旋度也是手性的表现。此外,在发展思想的框架内,由于螺旋结构的非线性阀属性,结构元素属性的手性分裂确保了机器沿着能量循环的单向运动。就旋转自由度而言,螺旋结构可以作为不对称的、非线性的、机械的、包括开关的分子机器的结构元素(如棘轮爪装置)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
SYMMETRY BREAKING IS THE PHYSICAL BASIS FOR THE PERFORMANCE OF "USEFUL WORK" BY BIOLOGICAL MOLECULAR MACHINES
The physical basis for the functioning of living systems are molecular machines. The performance of "useful work" is the essence of their biological functions. Molecular machines are chiral hierarchically organized devices (constructions). They cyclically transform the form of energy by changing or switching symmetries in its chiral structural elements, which just realize the selected “quasi-mechanical” degrees of freedom in them. The phenomenon of chirality allows the formation of discrete chirally sign-alternating hierarchies of structures in macromolecular machines in the process of folding: starting from the level of asymmetric carbon in deoxyribose and amino acids. Previously, we have identified and analyzed the tendency of alternation of the sign of chirality of the intramolecular structural levels D-L-D-L for DNA and L-D-L-D for proteins. Helicity and superhelicity of intramolecular and supramolecular structures are also manifestations of chirality. Also, within the framework of the developed ideas, the chiral splitting of the properties of the elements of the structures ensures the unidirectional movement of machines along the energy cycle due to the nonlinear valve properties of the spiral structures. Spiral structures can serve as asymmetric, non-linear, mechanical, including switching, structural elements of molecular machines (like a ratchet-pawl device) in terms of rotational degrees of freedom.
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