异构架构下医学图像相似度分析的性能评价

J. Ferreira, M. C. Oliveira, Andre Lage Freitas
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引用次数: 12

摘要

过去几年,大医院的数据量增长迅速,尤其是医学图像。这种增长对医学专家提出了一个巨大的挑战:保持基于图像的诊断的高解释准确性。与基于内容的图像检索(CBIR)相结合的计算机辅助诊断软件可以通过允许专家从数据库中找到与参考图像相似的图像来为他们提供决策支持。然而,CBIR的一个众所周知的挑战是处理参考图像和图像数据库之间的所有比较所需的处理时间。本文提出了一种基于高性能并行OpenCL框架的异构单核、多核和多核医学图像相似度分析(ISA)的性能评估方法。采用CBIR算法对该算法进行了验证。该算法使用含有131,072个ct扫描的肺癌图像数据库,纹理属性作为图像特征,欧几里得距离作为图像比较指标。结果表明,OpenCL并行性可以提高ISA的性能,特别是使用GPU时,速度提高了3倍,36倍和64倍。结果还表明,与GPU全局内存相比,使用GPU本地内存进行欧几里得距离度量是不值得的,因为它的性能改进低,实现复杂性高。话虽如此,GPU是一种比集群、云和网格计算等分布式环境更安全的医疗CBIR方法,因为GPU的使用不需要将患者数据传输到其他机器上。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Performance Evaluation of Medical Image Similarity Analysis in a Heterogeneous Architecture
The volume of data has increased fast, particularly medical images, in big hospitals over the last years. This increase imposes a big challenge to medical specialists: the maintenance of high interpretation accuracy of image-based diagnosis. Computer-Aided Diagnosis software allied to the Content-Based Image Retrieval (CBIR) can provide decision support to specialists by allowing them to find images from a database that are similar to a reference image. However, a well known challenge of CBIR is the processing time that it takes to process all comparisons between the reference image and the image database. This paper proposes a performance evaluation of medical Image Similarity Analysis (ISA) in a heterogeneous single-, multi- and many-core architecture using the high performance parallel OpenCL framework. A CBIR algorithm was implemented to validate the proposal. The algorithm used a Lung Cancer image database with 131, 072 Computed Tomography scans, Texture Attributes for image features and Euclidean Distance for image comparison metrics. The results showed that the OpenCL parallelism can increase the performance of ISA, especially using the GPU, with speedups of 3x, 36x and 64x. The results also showed that it is not worth the use of GPU local memory for the Euclidean Distance metrics due to its low performance improvement and high implementation complexity in comparison to the GPU global memory. That being said, GPU is a safer medical CBIR approach than further distributed environments as clusters, cloud and grid computing because GPU usage does not require the patient data to be transfered to other machines.
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