{"title":"不同肿瘤细胞系药物敏感性的组织和药物特异性","authors":"Yan Wang","doi":"10.1145/3512452.3512462","DOIUrl":null,"url":null,"abstract":"Cancer cell lines are widely used in cancer research and medical science, but the usefulness and efficacy of using cancer cell lines remains controversial. In this study, I used the data from CCLE (Cancer Cell Line Encyclopedia) to investigate the tissue and drug specificity of drug sensitivities in different cancer cell lines. I fitted a sigmoid relationship between the dose amount and the median drug response, then used the fitted parameters to represent the drug sensitivity of each cell line. By using PCA (Principal Component Analysis), KNN (K-nearest neighbors) and multinomial logistic regression, there is no evidence supporting that there is any cancer cell lines clustering.","PeriodicalId":120446,"journal":{"name":"Proceedings of the 2021 5th International Conference on Computational Biology and Bioinformatics","volume":"24 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Tissue and Drug Specificity of Drug Sensitivities in Different Cancer Cell Lines\",\"authors\":\"Yan Wang\",\"doi\":\"10.1145/3512452.3512462\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Cancer cell lines are widely used in cancer research and medical science, but the usefulness and efficacy of using cancer cell lines remains controversial. In this study, I used the data from CCLE (Cancer Cell Line Encyclopedia) to investigate the tissue and drug specificity of drug sensitivities in different cancer cell lines. I fitted a sigmoid relationship between the dose amount and the median drug response, then used the fitted parameters to represent the drug sensitivity of each cell line. By using PCA (Principal Component Analysis), KNN (K-nearest neighbors) and multinomial logistic regression, there is no evidence supporting that there is any cancer cell lines clustering.\",\"PeriodicalId\":120446,\"journal\":{\"name\":\"Proceedings of the 2021 5th International Conference on Computational Biology and Bioinformatics\",\"volume\":\"24 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-12-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of the 2021 5th International Conference on Computational Biology and Bioinformatics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1145/3512452.3512462\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the 2021 5th International Conference on Computational Biology and Bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3512452.3512462","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
癌细胞系广泛用于癌症研究和医学科学,但使用癌细胞系的有用性和有效性仍然存在争议。在本研究中,我利用CCLE (Cancer Cell Line Encyclopedia)的数据,研究了不同癌细胞系药物敏感性的组织和药物特异性。我拟合了剂量量与药物反应中位数之间的s型关系,然后用拟合的参数表示每个细胞系的药物敏感性。通过PCA(主成分分析)、KNN (k近邻)和多项逻辑回归分析,没有证据支持存在任何癌细胞系聚类。
Tissue and Drug Specificity of Drug Sensitivities in Different Cancer Cell Lines
Cancer cell lines are widely used in cancer research and medical science, but the usefulness and efficacy of using cancer cell lines remains controversial. In this study, I used the data from CCLE (Cancer Cell Line Encyclopedia) to investigate the tissue and drug specificity of drug sensitivities in different cancer cell lines. I fitted a sigmoid relationship between the dose amount and the median drug response, then used the fitted parameters to represent the drug sensitivity of each cell line. By using PCA (Principal Component Analysis), KNN (K-nearest neighbors) and multinomial logistic regression, there is no evidence supporting that there is any cancer cell lines clustering.