利用肠道微生物革兰氏染色模式预测家蚕幼虫健康状况的CNN算法模型构建

Joongi Hong, Dockhan Yoon, Seoyeon Oh, Minsuh Kim, JiYeonn Lee
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摘要

本文通过家蚕幼虫粪便证实了大肠微生物环境作为个体健康指标的关键作用。为了进一步探讨这一点,利用肠道微生物革兰氏染色模式数据构建了基于人工智能的卷积神经网络(CNN)模型,并验证了其可用性。为了研究肠道炎症对个体健康的影响,在桑叶的基础上,饲喂不同浓度的硫酸葡聚糖钠(DSS)。实验组Proteobacteria在门水平的分布比例较低,而对照组的分布比例较高。在厚壁菌门中观察到相反的趋势,在亚分类阶段革兰氏染色模式的变化证实了这一点。实验组的物种多样性指数低于对照组,表明DSS溶液处理对个体健康有显著影响。结果,实验组的成茧速度更快,换壳率随体重增加而增加。CNN算法模型是利用实验组和对照组肠道微生物革兰氏染色模式的大数据建立的。使用验证组验证显示出较高的准确性。这些发现表明,利用CNN算法模型可以通过肠道微生物预测家蚕幼虫的健康状况,但在未来的研究中,可以进一步阐述革兰氏染色等预处理步骤。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Construction of CNN Algorithm Model for Predicting the Health Status of Bombyx Moth Larvae Using the Gram Staining Pattern of Intestinal Microbes
The present article confirms the crucial role of the microbial environment in the large intestine as a measure of individual health, as demonstrated through silkworm larvae feces. To further explore this, an artificial intelligence-based Convolutional Neural Network (CNN) model was constructed using Gram staining pattern data of intestinal microbes, and its usability was confirmed. In order to investigate the effect of intestinal inflammation on individual health, silkworm moth larvae were fed Dextran Sulfate Sodium (DSS) along with mulberry leaves, and the concentration of DSS was varied. The experimental group exhibited a low distribution ratio of Proteobacteria at the Phylum level, while the control group had a high distribution ratio. The opposite trend was observed in Firmicutes, which was confirmed by changes in the Gram staining pattern at the sub-classification stage. The experimental group had a lower species diversity index compared to the control group, suggesting a significant effect of the DSS solution treatment on individual health. As a result, cocoon formation occurred more rapidly in the experimental group, and the rate of molting increased with weight gain. The CNN algorithm model was developed using big data on Gram staining patterns of intestinal microbes from both the experimental and control groups. Verification using the validation group demonstrated high accuracy. These findings suggest that the health status of silkworm larvae can be predicted through intestinal microbes using the CNN algorithm model, provided that pre-processing procedures such as Gram staining are further elaborated in future studies.
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