基于总线相位寻址的数字微流控环布局调度与路由算法

Megha Gupta, Srinivas Akella
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引用次数: 4

摘要

数字微流控系统(DMFS)是一类用于生化分析的新型芯片实验室系统。DMFS使用电润湿来操纵平面电极阵列上的离散液滴。化学分析是通过反复移动、混合和分裂电极上的液滴来进行的。最近,人们对开发用于DMFS设计、仿真和性能评估的算法和计算工具非常感兴趣。在本文中,我们提出了一种基于总线相位寻址的环形布局批处理操作中协调液滴运动的算法。在母线相系统中,每个电极不是单独可寻址的,而是由同一信号控制的一组电极。虽然这种硬件设计简化了芯片制造,但它增加了液滴路由的复杂性。所提出的算法允许多个独立的反应,每个反应有两个反应物和一个产物,以及多个阶段的链式反应,其中每个阶段为下一阶段产生反应物,同时在芯片上进行。该算法可扩展到不同数量的限制内的反应,这取决于布局的大小,源的位置和所用相的数量。它还解决了液滴需要在指定时间内访问传感器位置的任何传感器限制。我们给出了使用我们的算法来协调液滴运动的仿真结果,例如对环形布局的分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A scheduling and routing algorithm for digital microfluidic ring layouts with bus-phase addressing
Digital microfluidic systems (DMFS) are a new class of lab-on-a-chip systems for biochemical analysis. A DMFS uses electro wetting to manipulate discrete droplets on a planar array of electrodes. The chemical analysis is performed by repeatedly moving, mixing, and splitting droplets on the electrodes. Recently, there has been a lot of interest in developing algorithms and computational tools for the design, simulation, and performance evaluation of DMFS. In this paper, we present an algorithm for coordinating droplet movement in batch mode operations on ring layouts with bus-phase addressing. In bus- phase systems, each electrode is not individually addressable, instead a set of electrodes are all controlled by the same signal. Though this hardware design simplifies chip fabrication, it increases the complexity of routing droplets. The presented algorithm allows multiple independent reactions, each with two reactants and one product, and chain reactions with multiple stages, where each stage produces reactants for the next stage, to take place simultaneously on the chip. This algorithm is scalable to different number of reactions within a limit which depends on the size of the layout, placement of sources and number of phases used. It also addresses any sensor constraints under which droplets need to visit sensor locations for specified amounts of time. We present simulation results using our algorithm to coordinate droplet movements for example analyses on a ring layout.
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