多核系统中MPI节点内通信的高效内核级和用户级混合方法设计

Lei Chai, P. Lai, Hyun-Wook Jin, D. Panda
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引用次数: 33

摘要

多核处理器的出现使得MPI节点内通信成为高性能计算的关键组成部分。在本文中,我们使用三步方法从两种流行的方法:共享内存和操作系统内核辅助的直接复制设计一个有效的MPI节点内通信方案。我们使用英特尔四核集群进行研究。我们首先运行微基准测试来分析这两种方法的优点和局限性,包括处理器拓扑、通信缓冲区重用、进程倾斜效应和L2缓存利用率的影响。基于结果和分析,我们提出了拓扑感知和倾斜感知阈值来构建优化的混合方法。最后,我们使用IMB、NAS、PSTSWM和HPL基准评估了混合方法对MPI集体操作和应用的影响。我们观察到,优化后的混合方法可以将MPI集体操作的性能提高60%,应用程序的性能提高17%。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Designing an Efficient Kernel-Level and User-Level Hybrid Approach for MPI Intra-Node Communication on Multi-Core Systems
The emergence of multi-core processors has made MPI intra-node communication a critical component in high performance computing. In this paper, we use a three-step methodology to design an efficient MPI intra-node communication scheme from two popular approaches: shared memory and OS kernel-assisted direct copy. We use an Intel quad-core cluster for our study. We first run micro-benchmarks to analyze the advantages and limitations of these two approaches, including the impacts of processor topology, communication buffer reuse, process skew effects, and L2 cache utilization. Based on the results and the analysis, we propose topology-aware and skew-aware thresholds to build an optimized hybrid approach. Finally, we evaluate the impact of the hybrid approach on MPI collective operations and applications using IMB, NAS, PSTSWM, and HPL benchmarks. We observe that the optimized hybrid approach can improve the performance of MPI collective operations by up to 60%, and applications by up to 17%.
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