双对角化和r -双对角化:并行平铺算法、关键路径和分布式内存实现

Mathieu Faverge, J. Langou, Y. Robert, J. Dongarra
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引用次数: 3

摘要

我们研究了使用正交变换从“满”矩阵到浓缩“带双对角”形式的平铺算法:(i)平铺双对角化算法BIDIAG,它是标准标量双对角化算法的平铺版本;(ii) R-双对角化算法R-bidiag,这是该算法的平纹版本,它包括首先对初始矩阵进行QR分解,然后对R-因子进行带双对角化。对于BIDIAG和R-BIDIAG,我们使用了四种主要类型的约简树,即FLATTS、FLATTT、GREEDY和新引入的自适应树AUTO。我们对这些平铺算法的关键路径长度进行了研究,结果表明(i)对于高矩阵和瘦矩阵,R-BIDIAG具有比BIDIAG更短的关键路径长度,并且(ii)基于贪心的方案比先前提出的无界资源算法要好得多。我们在一个多核节点和一个并行分布式共享内存系统的几个多核节点上进行了实验,以显示新算法在各种矩阵大小、矩阵形状和核数上的优越性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bidiagonalization and R-Bidiagonalization: Parallel Tiled Algorithms, Critical Paths and Distributed-Memory Implementation
We study tiled algorithms for going from a "full" matrix to a condensed "band bidiagonal" form using orthog-onal transformations: (i) the tiled bidiagonalization algorithm BIDIAG, which is a tiled version of the standard scalar bidiago-nalization algorithm; and (ii) the R-bidiagonalization algorithm R-BIDIAG, which is a tiled version of the algorithm which consists in first performing the QR factorization of the initial matrix, then performing the band-bidiagonalization of the R- factor. For both BIDIAG and R-BIDIAG, we use four main types of reduction trees, namely FLATTS, FLATTT, GREEDY, and a newly introduced auto-adaptive tree, AUTO. We provide a study of critical path lengths for these tiled algorithms, which shows that (i) R-BIDIAG has a shorter critical path length than BIDIAG for tall and skinny matrices, and (ii) GREEDY based schemes are much better than earlier proposed algorithms with unbounded resources. We provide experiments on a single multicore node, and on a few multicore nodes of a parallel distributed shared- memory system, to show the superiority of the new algorithms on a variety of matrix sizes, matrix shapes and core counts.
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